Gene Gdia_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2966 
SymbolrplC 
ID6976400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3252455 
End bp3253138 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID643392474 
Product50S ribosomal protein L3 
Protein accessionYP_002277311 
Protein GI209545082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0816974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG GATTGATCGC AAAGAAGCTG GGCATGACCC GGCTGTTCAA GGAAGACGGC 
ACCCACGTGC CCGTCACCGT CCTGCATGTC GATAACCTGC AGGTGGTGGA TGTCCGTACC
CAGGACCGCG ACGGCTATAC CGCCGTGCAG TTGGGCTTCG GCAACGCCAA GGTGAAGAAT
GTCTCCAAAC CGAATCGCGG CCATTTTGCT CGCGTGAAGG TCGAACCCAA GAAGAAGCTG
GCCGAGTTCC GCGTGGCGGA CGATGCCGTG CTGGAAGCAG GCGCGACCCT GTCTGCCGCC
CATTTCGTGG TCGGGCAGAA GGTCGACGTG ACCTCCACCA GCAAGGGCAA GGGCTTTGCC
GGCGCCATGA AGCGCTGGAA CTTCGCGGGT CTCGAAGCCT CGCACGGCGT GTCCATCAGC
CATCGTTCGC ATGGCTCGAC GGGTAACCGC CAGGATCCGG GCAAGACCTT CAAGAACAAG
AAAATGGCCG GCCATCTGGG CTCCGAACGC GTGACCACCC TCAATCTCGA GGTGGCGGCG
GTGGATGCCG AGAAGAATCT GCTCATGGTC CGCGGCTCCG TGCCCGGCGG CAAGAACGAG
CTGGTTCTGG TTCGTGATGC GATCAAGAAG GCCCGTCATG CCGAGGCGCC GTATCCGGCG
GCCCTGGTTG CGGCTGCGGG CTGA
 
Protein sequence
MRTGLIAKKL GMTRLFKEDG THVPVTVLHV DNLQVVDVRT QDRDGYTAVQ LGFGNAKVKN 
VSKPNRGHFA RVKVEPKKKL AEFRVADDAV LEAGATLSAA HFVVGQKVDV TSTSKGKGFA
GAMKRWNFAG LEASHGVSIS HRSHGSTGNR QDPGKTFKNK KMAGHLGSER VTTLNLEVAA
VDAEKNLLMV RGSVPGGKNE LVLVRDAIKK ARHAEAPYPA ALVAAAG