| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2954 |
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| Symbol | |
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| ID | 6976388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3236093 |
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| End bp | 3237697 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643392463 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002277300 |
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| Protein GI | 209545071 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.15376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGG TATCAGTGTC TTCGTGTGCT TTGCGGAGTA CATGGCGTAG ATTTGCGAAT
TGGACTGCGT TGGCGGGTGT GGTGTTTCTG GGCGGTTGCG ATCTTGCACC GACCTATCAT
CCTGTGAAGC TTGCCTATCC AGATAATTGG GAGGGCAGCG GAGTCTTCCG TTTCGGTCGT
CCCGACGAGG CGGCTCCGAG GAAAGACTGG TGGACTGTAT TCAATGATCC GCAGTTGAAC
GCTTTGGAAG ATCAGGTCGC GCGGCTTAAT CCGGATCTGC AGGCCGAAGC GGAAGCGTTC
ATGCAGGCTC GCGATATCGC CATGCAGGCA CGTTCGCAAC TGTTTCCCCA GATCAGCGGC
GGGGCTGGCG GAGAAAAAGA GAAAAGTTCG GCGCATAGAT TATGGCGCGC CGAAGGTTCG
ACCACTCCTC TGTATATGTC TTCCGAACAA TATTACGGGT CGGCAACATG GGAGCCGGAT
TTTTGGTCGT CGATCAGAAA TAAGACCAGA ATGGCGAAGG AGGCGACCCA GCAACTCGCC
GCGGACTACG CACTGGCCCG CCTGAGCATT CAAAGTGAGG TTGCCAGCGA TTATATCGCT
CTTCGCGGCT TCGATGCGCA GGACGCGGTG TACCGTGATT CGATTGCGTA CTATCAGCAG
GCAGTCTCCA TCACCCAGCT CCGGCTTGCT GGCGCGATAT CGCCTGGCAT GGACGTTGCG
CGTGCCCAAA CCCAGTTCTA TGCCACGCAG GCCCGGGAAA CCGATGTGCG GGCTGCGCGG
GATGTGCTCG AACACGCGAT CGCCGTGCTG GTTAACAAGG CGCCGGCCTC TTTTCACATC
GCGCCGGTCG ACAGTTACCC GTTCGCCCCC GTGCAACTTC CGGTTGTACT GCCATCGGAA
CTTCTTCAGC GGCGCCCGGA TATCGCATCT GCTGAACGGT CTATGGCGCA GGCAAACCGG
GCGATCGGCG TTTCAAGGGC TGCATTCTAT CCGCATGTGA CCTTCAATGC CATGACCGGT
TTTATGGACC ATGGGTTCGA CCTCGCGTCA CTGTCGAATT CCATGTACCA GTTTGGTGCA
CAAGCCGTTT TGCCGATATT TACGGCGGGT CTTCGCCGGG CTGAATTGCA GCGCACCTGG
TCGCAGTACC GCCAGTCGGA AGATAAATAT CGTTCGACGG TGCTGGGCGC GTTTCGTGAG
GTCGAGGATA ATCTGACGCT GACCAGCCGT CTTCGTACAG AAACCACTCA GGCGTCGGAA
GCCGTCAATG CAGCCCTGAG AACGCAGCGG ATGTCCATGG CGCTTTATAC AGGCGGGCTG
ACCAATTACC TGGATGTTGT TGTCGCACAG CAGGCCGCAT TGGAAGCGCG CATAATCCTC
GTGCAGGTGC AGGCGCGACA GTCTGATGCC GAGGTTCAGT TGGTCCGGGC ATATGGTGGC
GGATGGTCTA CAGGCGAACT GCCTGCATCA GACAGTTCCA TCATGCCTTT TTCGCCTCTG
CAATATAACG AGTTGGACAG GTCGAAACCG CTTGCAGGGA TCAGTGTGGA TCCGGTGGCT
GGTGCGACGG ACCTCGGAAG CAATCCTGTC CCGCCCAAGC ATTGA
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| Protein sequence | MNRVSVSSCA LRSTWRRFAN WTALAGVVFL GGCDLAPTYH PVKLAYPDNW EGSGVFRFGR
PDEAAPRKDW WTVFNDPQLN ALEDQVARLN PDLQAEAEAF MQARDIAMQA RSQLFPQISG
GAGGEKEKSS AHRLWRAEGS TTPLYMSSEQ YYGSATWEPD FWSSIRNKTR MAKEATQQLA
ADYALARLSI QSEVASDYIA LRGFDAQDAV YRDSIAYYQQ AVSITQLRLA GAISPGMDVA
RAQTQFYATQ ARETDVRAAR DVLEHAIAVL VNKAPASFHI APVDSYPFAP VQLPVVLPSE
LLQRRPDIAS AERSMAQANR AIGVSRAAFY PHVTFNAMTG FMDHGFDLAS LSNSMYQFGA
QAVLPIFTAG LRRAELQRTW SQYRQSEDKY RSTVLGAFRE VEDNLTLTSR LRTETTQASE
AVNAALRTQR MSMALYTGGL TNYLDVVVAQ QAALEARIIL VQVQARQSDA EVQLVRAYGG
GWSTGELPAS DSSIMPFSPL QYNELDRSKP LAGISVDPVA GATDLGSNPV PPKH
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