| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2953 |
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| Symbol | |
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| ID | 6976387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3234819 |
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| End bp | 3236096 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643392462 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002277299 |
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| Protein GI | 209545070 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.104314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG ATAAGAGGTT GAGCCCTTCG GGTTCGGATG GACGCGGGTC GCGCAAGGTG
CTCTGGCTGG TTGCCTGTGT GGCCGTCGTT CTTGCCGCTG TCGGCATCGT TCAGCGTCGC
CTGCATTACG TGCATCTTCA GGGCCAGACG ACCGAGGCGT CCATACCCGA CGTGCAGATG
ACCGATGTTT TGCCTGGTCC GGCGACGCGT GACCTCACGC TCCCTGCGAA TATCGAGGCC
TGGTATGAGG CGCCGATTTA CGCTCAGGTC TCTGGTTACG TCAAAATGTG GTATACGGAT
TTTGGAGCGG TGGTGAAGCA GGGCGATGTC CTGGCTGAGA TCAACACGCC GTCTCTCGAC
GCGGAATACC ATGCGGCCCA GGCCAACTTG AATGTAGAGT TGGCCAAATA CAAACTCGCG
GTGATCACGG CGGATCGTTG GAAAGCCCTG CAAGGAACGC AAGCTGTCGC ACAGCAGGAG
GTCAGTGTTC AGGTGGCCAA CGCGGCGGCT CAGGAAGCGC GGGTAGATGC GGCCAGGCAT
GCCGTCGACC GATACGAAGC GCTGGAAGGG TTCAAGAAAA TTGTCGCCCC GTTTGACGGG
ATTGTGACGA ACCGCTTTGT CAACGTTGGT GCGTATGTCA ACGCGGGCCG TGGCGACGTC
ACGGCGCAGG GCGGGGCGGC TGAACTGTTC AGTGTGGCAG ATGTTCATGC CATGCGTGTT
TTTGTCAGCG TGCCGCAAGA TTACGCTAGT GTGATTTCTC CGAAGTTGAA GGTTAGTCTG
TCTGTGCCGC AGTTCCCGGG CAGGAAGTTT ACGGCAAAAT ATCTGACAAC GGCGGCGGCG
TTTAATGCGT CGACCCGCAC GGTTACGACC GAGCTTACGG TTGATAATCC TGATCGGCTG
CTGTGGCCGA ATTCGTACGC GTCGGCGTTC ATGCAGGCAC CGGGGAATCC TGACCTGGCG
ATTATTCCCG AATCCGCGCT GATTTTCCGT GCGCAGGGAA CGCAGGTTGC GACCGTGGAC
AGCGGCGGTT ATGCCCATCT TGTTTCGGTG ACGGTCGGGA ATAATCTCGG GAACGCGGTT
GAATTACTTT CAGGCGTGCA TAAAGGCGAG CGTATTATCG ACAATCCGTC GGCAGGGTTG
CTGGAGGGGC AGAAGGTTAG AATCGTGCCC CCGACGCTGG GGTATAATGT GCAGCCTCAA
CCACATGCCG AGGGCACGAA TGACAACGCA CGTGCCATGC CCGAAGAGGG TTCTGCTCCA
TCAGAGGATC GGAAATGA
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| Protein sequence | MSADKRLSPS GSDGRGSRKV LWLVACVAVV LAAVGIVQRR LHYVHLQGQT TEASIPDVQM
TDVLPGPATR DLTLPANIEA WYEAPIYAQV SGYVKMWYTD FGAVVKQGDV LAEINTPSLD
AEYHAAQANL NVELAKYKLA VITADRWKAL QGTQAVAQQE VSVQVANAAA QEARVDAARH
AVDRYEALEG FKKIVAPFDG IVTNRFVNVG AYVNAGRGDV TAQGGAAELF SVADVHAMRV
FVSVPQDYAS VISPKLKVSL SVPQFPGRKF TAKYLTTAAA FNASTRTVTT ELTVDNPDRL
LWPNSYASAF MQAPGNPDLA IIPESALIFR AQGTQVATVD SGGYAHLVSV TVGNNLGNAV
ELLSGVHKGE RIIDNPSAGL LEGQKVRIVP PTLGYNVQPQ PHAEGTNDNA RAMPEEGSAP
SEDRK
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