Gene Gdia_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2909 
Symbol 
ID6976343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3187316 
End bp3189379 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content72% 
IMG OID643392418 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_002277255 
Protein GI209545026 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0213338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGT CTTCGGACCA GGACCAATCC GAGGATTCGG GTCTGCCCGT GCCGCCCGAT 
GACGGGCCCG GCCTGTTCGG CGACTCGCCT TCTCCCGCTG CGCCGCCGCC CGCCCCCCTC
GTAGCCCCGG TGGCCGCTTC TGGGGGCGCT TCTGGGGCCG CGAAACCGTA TCGCGTGCTG
GCGCGCAAAT ACCGCCCGAC GACCCTGGAC GACCTGATCG GCCAGGATTC GACCGTCCGC
ATCCTGCGCA ACGCCTTCGC GCTGGGCCGG GTGGCGCATG CCTTCATGCT GACCGGCGTG
CGCGGGGTGG GCAAGACGAC GACGGCGCGC ATCATCGCCC GGGCGCTGAA CTGCGTCGGG
CCGGACGGCA CCGGCGGCCC CACCGCCGAC CCGTGCGGGG TGTGCGCCAA CTGCGTCGCG
ATCCTGGCAG ACCGCCACCC GGACGTGCTG GAAATGGACG CGGCCTCGCG CACCGGCGTG
GACGACGTGC GCGAAATCAT CGAGGCCACG CGCTTCCGCC CGATGCAGGG GCGCATGAAG
GTCTTCATCA TCGACGAGGT CCACATGCTG TCGCGCAACG CGTTCAACGC GTTGCTCAAG
ACGCTGGAGG AACCGCCGGC CCAGGTGACG TTCGTCTTCG CCACCACGGA ACTGCGCAAG
GTGCCGGTGA CGGTGCTGTC GCGCTGCCAG CGATTCGACC TGCGCCGGGT GCCGCAATCC
GACCTGGCCG CCCATTTCGG GCGCATCGCC CGGGCCGAGG GCGCGGAATG CACGCCCGAC
GCGCTGGCGC TGATCGCCCG GGCGGCGGAC GGATCGGTGC GCGACGGGCT GTCGCTGCTG
GACCAGGCGA TCGCCCAAGG CAGCGTCGAG GGGGATGGCG CGGCGCCGAT CGGCGCGGAA
CGCGTGGCCG ACATGCTGGG CCTGGCGGAC CGCGGGCGGG TATTCGACCT GCTGGAAGCC
GTGCTGGCCG GCCAGCCGGA CCGCGCGCTG GCCATCACCG ACGAGGCCCA CGCGCGCGGC
GCCGACCTGG GCGTCATGCT GGGGGACGTG CTGGAACTGG TCCATACCGT GTCGCGGCTG
AAGGCGGTGC CGGCGCTGCG CCAGTCGGCC GACCTGCCGG AAGCCGAGCG CGAGCGTGGC
GGCGCCCTGG CCGACCGGCT GTCGGTGCCG GTGCTGGGGC GGACGTGGCA GATGCTGCTG
AAGGGCCTGT CGGAGGTCGA AATGGCCCCC GACCGGCGCG AGGCCGCCGA GATGATCCTG
ATCCGCCTGT GCTACGTGGC CGACCTGCCG CCGCCGGGCG ACCTGGTGCG GCGCCTGACG
GAGGGCGGGG AAACCGGGGG CAGCGGATCG GGCGCGCTGT CCGGTGGCCC CGCGCAGGGA
ACGTCGCAGG GCACTTCGGC ATCGGGCCTT TCCGTTCCGG GCCGCCCGGT ATCCGGAAAC
CCGGTCTCCG GCGGGCAGGT CATGGCCCAT GGCGGCTTGC GGATGGTCGC CAATGGCGGC
GTGCGGATCG CCGACCCGGT GGCCGAGCCG GCGCCTGAAC CGGTGCCCGT CGAACCCGCG
CCCGAACCGG AGCCGGACGC GGCGGCGCTG ACGACGTGGC GCGAGGTCGT GGCCTTCGTG
TCCGGGCGCG ATGCCATGCT GCACGGCCAT CTGCGCCATT CCACCCACCT GGTGGAATTC
GCCCCCCCGC GGATCGCGAT CCGGGTGGAC CGCGCCGGCC TGCCGGGCCT GACGCGGCGG
CTGGAAACCC TGCTGCGGCG CGAGACCGGC CAGGCGTGGG AGGTCCGCGC CTCGACCGAG
GCCGGGCAGC CGACCCTGGC GGAACAGGGT GCCGAGATCA TCCAGTTCCA TCGCGCGGCG
GCCGAGGCCC ATCCCCTGGT GCGGGCGATT TTCGCGCGCT TTCCGGATGC GATTCTGGGG
GCCGTGACCG ATCATTCGCT TGACGATTAC GGTCTTCCGC CCGAAGAGGC GGCATCCGTC
GTACTGGCGC CGGATCTGGA ATTCGCGCCC CTCGATGCCG AACTGGTGGA TGAGGACGAT
TTGGACGTGA ACGACGACAG GTGA
 
Protein sequence
MTVSSDQDQS EDSGLPVPPD DGPGLFGDSP SPAAPPPAPL VAPVAASGGA SGAAKPYRVL 
ARKYRPTTLD DLIGQDSTVR ILRNAFALGR VAHAFMLTGV RGVGKTTTAR IIARALNCVG
PDGTGGPTAD PCGVCANCVA ILADRHPDVL EMDAASRTGV DDVREIIEAT RFRPMQGRMK
VFIIDEVHML SRNAFNALLK TLEEPPAQVT FVFATTELRK VPVTVLSRCQ RFDLRRVPQS
DLAAHFGRIA RAEGAECTPD ALALIARAAD GSVRDGLSLL DQAIAQGSVE GDGAAPIGAE
RVADMLGLAD RGRVFDLLEA VLAGQPDRAL AITDEAHARG ADLGVMLGDV LELVHTVSRL
KAVPALRQSA DLPEAERERG GALADRLSVP VLGRTWQMLL KGLSEVEMAP DRREAAEMIL
IRLCYVADLP PPGDLVRRLT EGGETGGSGS GALSGGPAQG TSQGTSASGL SVPGRPVSGN
PVSGGQVMAH GGLRMVANGG VRIADPVAEP APEPVPVEPA PEPEPDAAAL TTWREVVAFV
SGRDAMLHGH LRHSTHLVEF APPRIAIRVD RAGLPGLTRR LETLLRRETG QAWEVRASTE
AGQPTLAEQG AEIIQFHRAA AEAHPLVRAI FARFPDAILG AVTDHSLDDY GLPPEEAASV
VLAPDLEFAP LDAELVDEDD LDVNDDR