| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2891 |
|---|
| Symbol | |
|---|
| ID | 6976324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3168048 |
|---|
| End bp | 3169727 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643392400 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_002277237 |
|---|
| Protein GI | 209545008 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.315278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00408651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA CGCAATATGT CTATGTGATG AAGGACCTGA CCAAGGCGTA TCCGGGCGGG
CGCGAGGTCT TCAAGGGCAT CACCCTGTCC TTCCTGCCGG GGGTCAAGAT CGGGGTGCTG
GGCGTCAACG GCGCCGGCAA ATCCACCCTG CTGAAGATCA TGGCCGGGAT CGAGAAGGAA
TTCGGCGGCG AGGCCTGGGC CGCCGAGGGC GCCCGGATCG GCTATCTGGA GCAGGAGCCC
AAGCTGGACG AATCGCTGAC GGTCGGCGAG AACGTGGCGC TGGGCTTCGG CGCGCTGAAG
ACCGCCGTCG ATCGCTTCAA CGAAATCTCG ATGCTGTTCG CCGAGCCGAT GTCGGACGAC
GAAATGACCG CCCTGCTGGC CGAACAGGCC GAACTGCAGG AAAAGATCGA TGCCGGCGAC
GGCTGGGAAC TGGACCGCAA GATCGACATC GCGCTGGACG CGCTGCGCTG CCCGCCGGCC
GAAAGCGCCG TGACCCGCCT GTCGGGCGGC GAGCGCCGGC GCGTGGCGCT GTGCCGCCTG
CTGCTGGAAA AGCCCGACCT GCTGCTGCTG GACGAACCGA CCAACCATCT GGACGCCGAA
AGCGTGGCGT GGCTGGAACG CACGCTGCGC GACTACCAGG GCACGGTGAT GGTCATCACC
CATGACCGCT ACTTCCTGGA CAACGTCACC AACTGGATCC TGGAGCTGGA GCGCGGCCGG
GGCTTCCCGT TCCAGGGCAA TTATTCCTCG TGGCTGGAAC AGAAGCGCAA GCGCCTGGCC
CAGGAGGAAA AGGAAGAAAG CGCCCGCCAG CGGGCCCTGG CGGCCGAGCA GGAATGGATC
GGGTCCAGCC CCAAGGCGCG CCAGGCCAAG AGCAAGTCGC GCATTGCGCG CTACGAGGAA
ATGCTGGCCC TGAACGCCGA GCGTGCCGGC GGCACCGCCG ACATCGTCAT CCCGCCGGGC
CCCCGCCTGG GCGGCACGGT GATCGAAGCC GAGGACCTGC GCAAGGCGTT CGGCAACCGG
CTGCTGATCG ACGACCTCAG CTTCAAGCTG CCGCCGGGCG GCATCGTGGG GGTCATCGGG
CCCAACGGCG CGGGCAAGTC CACCCTGTTC CGCATGATCG TGGGGCAGGA AGAGCCCGAC
GCGGGCTCGC TGAAGGTCGG GGAGACCGTC AAGCTGGGCT ATGTGGACCA GTCGCGCGAC
AGCCTGGATG ACGACAAGAC GGTGTGGGAG GAAATTTCCG GCGGCACCGA CGTCATCTAT
CTGGGCAAGC GCGCGGTGCC GTCGCGGGCC TATGTCGGCG CGTTCAACTT CAAGGGCGCG
GACCAGCAGA AGAAGGTCGG CATCCTGTCG GGCGGCGAGC GCAACCGCGT GCACCTGGCC
AAGATGCTGC GCCAGGAAAG CAACGTCATC CTGCTGGACG AACCGACCAA CGACCTGGAC
GTGGACACGC TGCGCGCGCT GGAAGATGCG CTGGCGGAAT TCGCCGGCTG CGCCGTGATC
ATCAGCCATG ACCGCTGGTT CCTCGACCGC CTGGCGACGC ATATCCTGGC CTTCGAGGGC
GACAGCCACG TCGAATGGTT CGAGGGTAAT TTCCAGGCCT ATGAAGAGGA CAAGCGACGC
CGACTGGGCC CTGACGCGAC CGAGCCGGGA CGGATCAAAT ACCGCCCGCT CGCACGCTGA
|
|---|
| Protein sequence | MAATQYVYVM KDLTKAYPGG REVFKGITLS FLPGVKIGVL GVNGAGKSTL LKIMAGIEKE
FGGEAWAAEG ARIGYLEQEP KLDESLTVGE NVALGFGALK TAVDRFNEIS MLFAEPMSDD
EMTALLAEQA ELQEKIDAGD GWELDRKIDI ALDALRCPPA ESAVTRLSGG ERRRVALCRL
LLEKPDLLLL DEPTNHLDAE SVAWLERTLR DYQGTVMVIT HDRYFLDNVT NWILELERGR
GFPFQGNYSS WLEQKRKRLA QEEKEESARQ RALAAEQEWI GSSPKARQAK SKSRIARYEE
MLALNAERAG GTADIVIPPG PRLGGTVIEA EDLRKAFGNR LLIDDLSFKL PPGGIVGVIG
PNGAGKSTLF RMIVGQEEPD AGSLKVGETV KLGYVDQSRD SLDDDKTVWE EISGGTDVIY
LGKRAVPSRA YVGAFNFKGA DQQKKVGILS GGERNRVHLA KMLRQESNVI LLDEPTNDLD
VDTLRALEDA LAEFAGCAVI ISHDRWFLDR LATHILAFEG DSHVEWFEGN FQAYEEDKRR
RLGPDATEPG RIKYRPLAR
|
|---|
| |