| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2885 |
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| Symbol | |
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| ID | 6976317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3159570 |
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| End bp | 3161351 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 643392393 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002277231 |
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| Protein GI | 209545002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.048224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTCT TGTCTGCTTT GGGGGCGCGG TTGTCCCTGC GGGGGCGGCT GGCGCATGGC
GTGCGGCTGA TCGAGGCGGG CGACGCGGTG GGGGGTGTCG CCCAACTGGG CATGGTGGCC
GAGGCCGGGG TGGCGGAGGC CCAGTTTCGT GTCGGGCGGG CCTATCTGGA GGGGACCGGC
GTGCCGCGCA GCCTGGTCGA GGGCGCGCGC TGGATGCGCC GCGCGGCCGA GGCCGGGTGG
GTCGAGGCCC GGCTGGTGCT GGGGACGCTG TATCTGTTCG GCCTGCCGCG CGACGCGGCA
TCGGACCATG GCGTGCGGCT GGCGGCCGAG GCGCCGGGCG ATCGCGTGCC CGACCCGGAC
GAGGCCGCGT ACTGGACGCA CCTGGCGGCC GAGGCGGGCT CCCCCGACGC GCAGGCGCTG
TACGGCTACA TCCTGGCCGA TGGCCCCGTC GGCCTGCGCG ACCGGGTGGC GGCCGAGGGC
TGGTTCGCCC GCGCCGCCGC CGCCGGCTGC GCGCAGGGTC ATCTGGGGCT GGGCCTGACC
TGGATGCGCG CGGCGCTGCG GCACTCGCCG GAGGCCGCGT CCTCGGGCGA GGCCGACCGT
GCGCGCGCCG CCGGCGCGCT GCGCGTGGCC GCCGAGGCCG GGCTGGGCTC GGCGCAGTTC
CTGCTGGGGG CGCTGACCGA GCAGGGCAGC GGCGTCGCCC GCGACGTGGC GGCGGCCACC
GCGCTGTATG CCAGCGCCGC CCGGGCCGGG GTGTGCGCGG CGCAGGCGCG CTACGGCCTG
GCGCTGCTGG AGGGCAGGGG CTGCGCGCGC GACGCCGTGC AGGGCGAAAG CTGGCTGCGC
CGCGCGGCCC TGGCCGGCGA CCGCGAGGCC GCGTCGCTGC TGGGCGACCT GTATGCAAGG
GGCGGCGACC TGCCGCCGAA CGACGTGGAA GCCGCGTCGT GGTACCACCG CGCGGCGGCG
CTGGGCCATG CGGCGGCATG CCGGGCGCTG GGGCTGCTGC ACCTGGCCGG GGGCGGCCTG
CCGCGCGACG CGGCCGAGGC CGCGCGCTGC TTCCGGCAGG CCATGGCGCT GGGCGACGCC
CGGGCGGGTG CCGATCTGTG CAACCTGCTG CTGGCCGACC CGACGCTGAG CGCCGCGATG
TCGGACGACG AGCGGCGCGA GTTAGGCCGT TCCTTCGCCC GCGCGGCGCA GGAGGGGGAT
GCGGTCGCGG CGTTCAATTT CAGCATCTGC CTGGCGCAGG GGCTGGGGGT GGAGCGCGAC
GAAAACGCCG CCGCGTCGTG GATGAAGCGG GCGGCCGACG GAGTGGTGAA CGCCCGGTAC
TGGTATGGCC GCATGCTGCT GGAGGGCCGG GGGCACGCGC CCGACCCGGT GGCCGGCCGT
GCCTGGATCG CGCGGGCCGC CGAGGCCGGC ATGGCCGAGG CGCAGGTGGC GCTGGCGCAA
TTGCTGCTGA CCGGCAACGG CGGCGCCCGC GATCACGTCG GGGCGGCGGA CTGGTATCGC
CGGGCGGCGG AGCAGGGGCA GGTGGATGCC ATGTTCTCGC TGGGCGCGCT GCTGGGCGGG
GGGCATGACA TCCCGATGGA CCGTGTCCAG GCCCAGCACT GGTTCCGCAT GGCCGCCGAA
CGCGGCAACG CGCTGGGGCA GTTGATGCTG GGGCGCTATC TGCTGCGCGG GCTGGCCGGC
ACGATGGACG GCGCGCAGGC CCGGCACTGG CTGGACCGCG CCCGGGCGCA GGGCGTGGCG
GACGCGGCGG CCGAACTGGC GCACATGGAT GGGGCGGGCT GA
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| Protein sequence | MRVLSALGAR LSLRGRLAHG VRLIEAGDAV GGVAQLGMVA EAGVAEAQFR VGRAYLEGTG
VPRSLVEGAR WMRRAAEAGW VEARLVLGTL YLFGLPRDAA SDHGVRLAAE APGDRVPDPD
EAAYWTHLAA EAGSPDAQAL YGYILADGPV GLRDRVAAEG WFARAAAAGC AQGHLGLGLT
WMRAALRHSP EAASSGEADR ARAAGALRVA AEAGLGSAQF LLGALTEQGS GVARDVAAAT
ALYASAARAG VCAAQARYGL ALLEGRGCAR DAVQGESWLR RAALAGDREA ASLLGDLYAR
GGDLPPNDVE AASWYHRAAA LGHAAACRAL GLLHLAGGGL PRDAAEAARC FRQAMALGDA
RAGADLCNLL LADPTLSAAM SDDERRELGR SFARAAQEGD AVAAFNFSIC LAQGLGVERD
ENAAASWMKR AADGVVNARY WYGRMLLEGR GHAPDPVAGR AWIARAAEAG MAEAQVALAQ
LLLTGNGGAR DHVGAADWYR RAAEQGQVDA MFSLGALLGG GHDIPMDRVQ AQHWFRMAAE
RGNALGQLML GRYLLRGLAG TMDGAQARHW LDRARAQGVA DAAAELAHMD GAG
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