| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2884 |
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| Symbol | |
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| ID | 6976316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3158031 |
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| End bp | 3159470 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643392392 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002277230 |
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| Protein GI | 209545001 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0404561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG GAATGCTACC GCCCGGCGAG GGCGGCGCGA TCGAGGGCTA CATCCTGCCG
GCGGCGGAGG CGTCCACGGG CGACATGCCG CGCGCGCTGC TGGAATTCCA TTCGCCCAGC
GCGGCGCTGA TCGACCTGCC GCCCAACCCC GCCGCGCTGT ATATCACGTG GCTGATCTCG
ACCCTGGCGA TCGCGGGCAT CGTCGTGATG TCGGTCTGTC CGCTGGACCA GGTCGTGTCC
GCGCAGGGGC GGCTGACTTC GACCGACACC ACGCTGGTGG TCCAGCCGCT GGAAACCGCG
ATCATCCGGT CGATCGACGT GCAGGAAGGG GATGTCGTCC ACAGGGGCCA GGTGCTGGCC
CACCTGGACC CCACCGTGAC CGACGCGGAT GTCGAGAACA TGCGCCAGCA GCAGGCGGCC
TATGCCGCCC AGGTCGCGCG CCTGACCGCC GAGGCCGAGG GGCGGGACTA TATCCCCGAC
CCTGCCGACC CGGCATCGGT GCAGGAGGCG GCGGCCTTCC AGCGTCGCCG CGCGGAATTC
ACCGCCAAGG TCGAGAATTT CGACAAGCAG GCCGCCGGCG CGCGCAGCGA CATGCAGGGC
AGCCTGGCGG ATGCCGCGAT GTATGGCGCC CGCGCCCGCG TGGCGGCGAA CGTACATGCC
ATGCGCCTGC GCCTGCAGCG CGACCAGGTG GGCAGCCGCC TGTCCACCCT TTCGGCCCAG
AACGACCTGA TGGAGGTCGA GCGCGCGCAG ATCGCGGCGC AGCAGGCCGC CGGCAGCGCC
CGCGCGAAGC TGGAGGGCGT GACGGCCGCG CGCGACGGCT TCATCCAGAA CTGGAAGGCC
ACGGTGTACC AGGACCTGGC CACGGCGCAG CACCGGCTGG CCGATGCCGG GGACGATTAC
CGCAAGGCGG GGCTGCGCCG CAGCCTGATC GTCATGCGCG CCGACCGCGA TGCCGTGGTG
CTGAACATCG CCAGCCTGTC GGTGGGGTCC GTCATGCAGT CGGGCAACCA GTTGATGACC
CTGGTGCCGG TCGATGGCGG GCTGGAGGTC GAGACGGCGG TGCGGGGATC GGATGTCGGC
TTCATCCGGC CGGGGGACCC GGTGCTGCTG AAATTCGCCA CCTTCCCCTA CACCCAGTAT
GGCGGGGCCG AGGGCACGGT CCGAATCATC AGCGCCGATT CCTTCGCCCC CGGCGATGGC
GGGCATGCCG CCCCCGGCAC CGGCGCGCAG GTGCCGCGCC CCGACGCGGG CGGGATGGAG
GCCTATTATC GCGTGCGGGT GCGCGTCGAC CGCTACACGC TGCACGGCGT GCCGTCCTTC
TTCCACCCGC ATCCCGGCAT GCCGGTCGAA GCCGACATTC ATGTCGGCCG GCGCACCATG
ATGCAGTACC TCCTGAATCG GCTGGTGCCG ACGCTGACCG ATGGCATGCG CGAACCATAG
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| Protein sequence | MSAGMLPPGE GGAIEGYILP AAEASTGDMP RALLEFHSPS AALIDLPPNP AALYITWLIS
TLAIAGIVVM SVCPLDQVVS AQGRLTSTDT TLVVQPLETA IIRSIDVQEG DVVHRGQVLA
HLDPTVTDAD VENMRQQQAA YAAQVARLTA EAEGRDYIPD PADPASVQEA AAFQRRRAEF
TAKVENFDKQ AAGARSDMQG SLADAAMYGA RARVAANVHA MRLRLQRDQV GSRLSTLSAQ
NDLMEVERAQ IAAQQAAGSA RAKLEGVTAA RDGFIQNWKA TVYQDLATAQ HRLADAGDDY
RKAGLRRSLI VMRADRDAVV LNIASLSVGS VMQSGNQLMT LVPVDGGLEV ETAVRGSDVG
FIRPGDPVLL KFATFPYTQY GGAEGTVRII SADSFAPGDG GHAAPGTGAQ VPRPDAGGME
AYYRVRVRVD RYTLHGVPSF FHPHPGMPVE ADIHVGRRTM MQYLLNRLVP TLTDGMREP
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