Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2883 |
Symbol | |
ID | 6976315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3155809 |
End bp | 3158034 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643392391 |
Product | ABC transporter related |
Protein accession | YP_002277229 |
Protein GI | 209545000 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0605721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCAGC CAGACCCTGT GGAAGACACG CGGCCGACCC CGACGACGAT CTGCCTGCAT GCGGCCGCGG CGGCGGCGCG CTATCACGGG CTGTCGGTCG ATGTCCGCGA TTTCGTGGCC GAGCCGGGCG AGGTCTCGCC TTCGCCGGCG GCGCTGGCGC GGTGGCTGAA CGACCAGGGG GCGGTGGCGC GGGGCATGCG CCTGTCCTGG CGGGCGCTGG TGCGGGTGCG GAGTGCGCCG CCGGTGGTGC TGATGTTCCG CGACGGGTCG GCGGGACTGA TGGTGGCGGG CGATCCGGCG CGCGGCGTCG TGTGGCTGCG CGACCCGATG GGGGACGAGG GCACGCCCCC GGTGCCGCTG GACGAACTGC GCCTGTCGCA GGTCTGGACG GGCGACGTGC TGCTGGTCAA GCGCCGCCGC GACCAGTCCG AGGCCGACGC CCCCATCAAT GCCGAATGGC TGGGCCGCAT GGTCCTGCGC GAACGGCGCG CGCTGCGCGA TATCCTGCTG GCCTCGATGG TGCTGAGCGT GCTGGCGATC TTCCCGCCGC TGATCGTCAT GCAGGTGATC GACAAGGTGG TGAACTACCG GTCCATGTCC ACCCTGGTTT CGATCACCGC GATCCTGGGC GTCATGAGCT TCTATGAAAT CCTGCTGACC TATGCCCGGC GGGAACTGGC GCTGGTGGTC ACGACGCGGC TGGATACGCG GATTTCGCTG CTGGTGTTCG ACCGCCTGCT GGCGCTGCCG CTGGAATTCT TCGAACGCCA GCAGGCGGGG CAGGTCATCG GCCGCGTATC CGCCATCTAC CGGGTGCGGG ACTTCATGAC CGGCCGGCTG ATGAACACGG TGCTGGACCT GTTCACCCTG GTCGTGGTGC TGCCGTTCCT GTTCTATTTC AGCGCCACCC TGGCGTGGAT GACGCTGGCG GCGGCGGGGG CGATCGGGCT TGTGGTCGCC GGCTTCATGC TGCCCGTGGG GCGGCTGGTC GCGCGCAAGG TCCAGGCCGA CACCGCGCGC GGGGCGGCGC TGTACGAAAC CGTGGCCGGC ATCCGCACCA TCAAGACGCT GGCGCTGGAA CGCACGCGGC GGGAATTGTG GGACGACCGG TCCGCCCAGT CGGCGCTGTG GGGGCTGGCG GCGGGGCGGA TGGGCAACGT GGCCGCGACG GTCGCCCAGC CCTTCGAACT GTTCATCAAT CGCGGCATCC TGCTGGTCGG CGCGTACCTG GTACTGACCA ACCGGGGGGA CATGGCCGGC GGCGCACTGA TGGCGTTCAT GATGCTGGGC GGCCGCGTCG CGGCCCCGCT GGTCGGGCTG GCGCGGCTGC TGGACGATGC CGGCGAGGTC CGCACCGCCC TGGCCGAAGC CGGAACGGTG CTGAACCAGC CGACCGAGCG CCTGGCCATG ACCACCGGCC TGCGGCCCCG CATTCGCGGT GCCCTGTCCT TCGCCGATGT CAGCTTCAGC TATCCCGGCG CCACGACGCG GGCGCTGGCC GATGTCAGTT TCGAGGTCCC GGCCGGCAGC ATGCTGGGGC TGGTGGGGCG CAGCGGATCG GGCAAATCCA CCATCACCCG CCTGCTGCAG GGCGTCAGCC GGTCCTATAC CGGATACCTG AAGCTGGACG GAGTGGACCT GCGCGAGATC AACCTGGTGC ATCTGCGCCG GTCGTTCGGC GTGGTGCTGC AGGACAATTT CCTGTTTCGC GGCACCGTGC GCGACAACAT CACCGCCGGC CGGCCGGGCC TGACGCTGGA CGATGTGGTG CGTGCCGCCC GGCTGGCGGG GGCCGAGGAA TTCATCGAGC GCATGCCCGC CGGCTACGAG ACCTGGATCG AGGAAGGATC GACCAACATC TCGGGCGGGC AGCGGCAGCG CCTGGCCATC GCGCGCGCGC TGATCTGCGA CCCCAGGCTG CTGATCCTGG ACGAGGCGAC ATCGGCCCTG GACCCGGAAA GCGAGGCCGT GGTCAACGCC AACCTGCAGC GCATCGCGCG CGGGCGGACG ATGGTGATCG TCTCGCACCG CCTGTCCTCG CTGGTGGACT GCGACCAGAT CTGCGTCATG GACCAGGGAC GGGTGGCCGA TATCGGGCCG CACGCGGCGC TGCTGGACCG CTGCGCGATC TATCGCACGC TATGGTTCCA GCAGAACCGG CACGAGGCCC GGGGCCGCGA GCCCGCCCAT CCCGCCGCCA TGCTGGCCGA GGGGCAGGAG GCATGA
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Protein sequence | MAQPDPVEDT RPTPTTICLH AAAAAARYHG LSVDVRDFVA EPGEVSPSPA ALARWLNDQG AVARGMRLSW RALVRVRSAP PVVLMFRDGS AGLMVAGDPA RGVVWLRDPM GDEGTPPVPL DELRLSQVWT GDVLLVKRRR DQSEADAPIN AEWLGRMVLR ERRALRDILL ASMVLSVLAI FPPLIVMQVI DKVVNYRSMS TLVSITAILG VMSFYEILLT YARRELALVV TTRLDTRISL LVFDRLLALP LEFFERQQAG QVIGRVSAIY RVRDFMTGRL MNTVLDLFTL VVVLPFLFYF SATLAWMTLA AAGAIGLVVA GFMLPVGRLV ARKVQADTAR GAALYETVAG IRTIKTLALE RTRRELWDDR SAQSALWGLA AGRMGNVAAT VAQPFELFIN RGILLVGAYL VLTNRGDMAG GALMAFMMLG GRVAAPLVGL ARLLDDAGEV RTALAEAGTV LNQPTERLAM TTGLRPRIRG ALSFADVSFS YPGATTRALA DVSFEVPAGS MLGLVGRSGS GKSTITRLLQ GVSRSYTGYL KLDGVDLREI NLVHLRRSFG VVLQDNFLFR GTVRDNITAG RPGLTLDDVV RAARLAGAEE FIERMPAGYE TWIEEGSTNI SGGQRQRLAI ARALICDPRL LILDEATSAL DPESEAVVNA NLQRIARGRT MVIVSHRLSS LVDCDQICVM DQGRVADIGP HAALLDRCAI YRTLWFQQNR HEARGREPAH PAAMLAEGQE A
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