Gene Gdia_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2883 
Symbol 
ID6976315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3155809 
End bp3158034 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content70% 
IMG OID643392391 
ProductABC transporter related 
Protein accessionYP_002277229 
Protein GI209545000 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID[TIGR01846] type I secretion system ABC transporter, HlyB family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0605721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAGC CAGACCCTGT GGAAGACACG CGGCCGACCC CGACGACGAT CTGCCTGCAT 
GCGGCCGCGG CGGCGGCGCG CTATCACGGG CTGTCGGTCG ATGTCCGCGA TTTCGTGGCC
GAGCCGGGCG AGGTCTCGCC TTCGCCGGCG GCGCTGGCGC GGTGGCTGAA CGACCAGGGG
GCGGTGGCGC GGGGCATGCG CCTGTCCTGG CGGGCGCTGG TGCGGGTGCG GAGTGCGCCG
CCGGTGGTGC TGATGTTCCG CGACGGGTCG GCGGGACTGA TGGTGGCGGG CGATCCGGCG
CGCGGCGTCG TGTGGCTGCG CGACCCGATG GGGGACGAGG GCACGCCCCC GGTGCCGCTG
GACGAACTGC GCCTGTCGCA GGTCTGGACG GGCGACGTGC TGCTGGTCAA GCGCCGCCGC
GACCAGTCCG AGGCCGACGC CCCCATCAAT GCCGAATGGC TGGGCCGCAT GGTCCTGCGC
GAACGGCGCG CGCTGCGCGA TATCCTGCTG GCCTCGATGG TGCTGAGCGT GCTGGCGATC
TTCCCGCCGC TGATCGTCAT GCAGGTGATC GACAAGGTGG TGAACTACCG GTCCATGTCC
ACCCTGGTTT CGATCACCGC GATCCTGGGC GTCATGAGCT TCTATGAAAT CCTGCTGACC
TATGCCCGGC GGGAACTGGC GCTGGTGGTC ACGACGCGGC TGGATACGCG GATTTCGCTG
CTGGTGTTCG ACCGCCTGCT GGCGCTGCCG CTGGAATTCT TCGAACGCCA GCAGGCGGGG
CAGGTCATCG GCCGCGTATC CGCCATCTAC CGGGTGCGGG ACTTCATGAC CGGCCGGCTG
ATGAACACGG TGCTGGACCT GTTCACCCTG GTCGTGGTGC TGCCGTTCCT GTTCTATTTC
AGCGCCACCC TGGCGTGGAT GACGCTGGCG GCGGCGGGGG CGATCGGGCT TGTGGTCGCC
GGCTTCATGC TGCCCGTGGG GCGGCTGGTC GCGCGCAAGG TCCAGGCCGA CACCGCGCGC
GGGGCGGCGC TGTACGAAAC CGTGGCCGGC ATCCGCACCA TCAAGACGCT GGCGCTGGAA
CGCACGCGGC GGGAATTGTG GGACGACCGG TCCGCCCAGT CGGCGCTGTG GGGGCTGGCG
GCGGGGCGGA TGGGCAACGT GGCCGCGACG GTCGCCCAGC CCTTCGAACT GTTCATCAAT
CGCGGCATCC TGCTGGTCGG CGCGTACCTG GTACTGACCA ACCGGGGGGA CATGGCCGGC
GGCGCACTGA TGGCGTTCAT GATGCTGGGC GGCCGCGTCG CGGCCCCGCT GGTCGGGCTG
GCGCGGCTGC TGGACGATGC CGGCGAGGTC CGCACCGCCC TGGCCGAAGC CGGAACGGTG
CTGAACCAGC CGACCGAGCG CCTGGCCATG ACCACCGGCC TGCGGCCCCG CATTCGCGGT
GCCCTGTCCT TCGCCGATGT CAGCTTCAGC TATCCCGGCG CCACGACGCG GGCGCTGGCC
GATGTCAGTT TCGAGGTCCC GGCCGGCAGC ATGCTGGGGC TGGTGGGGCG CAGCGGATCG
GGCAAATCCA CCATCACCCG CCTGCTGCAG GGCGTCAGCC GGTCCTATAC CGGATACCTG
AAGCTGGACG GAGTGGACCT GCGCGAGATC AACCTGGTGC ATCTGCGCCG GTCGTTCGGC
GTGGTGCTGC AGGACAATTT CCTGTTTCGC GGCACCGTGC GCGACAACAT CACCGCCGGC
CGGCCGGGCC TGACGCTGGA CGATGTGGTG CGTGCCGCCC GGCTGGCGGG GGCCGAGGAA
TTCATCGAGC GCATGCCCGC CGGCTACGAG ACCTGGATCG AGGAAGGATC GACCAACATC
TCGGGCGGGC AGCGGCAGCG CCTGGCCATC GCGCGCGCGC TGATCTGCGA CCCCAGGCTG
CTGATCCTGG ACGAGGCGAC ATCGGCCCTG GACCCGGAAA GCGAGGCCGT GGTCAACGCC
AACCTGCAGC GCATCGCGCG CGGGCGGACG ATGGTGATCG TCTCGCACCG CCTGTCCTCG
CTGGTGGACT GCGACCAGAT CTGCGTCATG GACCAGGGAC GGGTGGCCGA TATCGGGCCG
CACGCGGCGC TGCTGGACCG CTGCGCGATC TATCGCACGC TATGGTTCCA GCAGAACCGG
CACGAGGCCC GGGGCCGCGA GCCCGCCCAT CCCGCCGCCA TGCTGGCCGA GGGGCAGGAG
GCATGA
 
Protein sequence
MAQPDPVEDT RPTPTTICLH AAAAAARYHG LSVDVRDFVA EPGEVSPSPA ALARWLNDQG 
AVARGMRLSW RALVRVRSAP PVVLMFRDGS AGLMVAGDPA RGVVWLRDPM GDEGTPPVPL
DELRLSQVWT GDVLLVKRRR DQSEADAPIN AEWLGRMVLR ERRALRDILL ASMVLSVLAI
FPPLIVMQVI DKVVNYRSMS TLVSITAILG VMSFYEILLT YARRELALVV TTRLDTRISL
LVFDRLLALP LEFFERQQAG QVIGRVSAIY RVRDFMTGRL MNTVLDLFTL VVVLPFLFYF
SATLAWMTLA AAGAIGLVVA GFMLPVGRLV ARKVQADTAR GAALYETVAG IRTIKTLALE
RTRRELWDDR SAQSALWGLA AGRMGNVAAT VAQPFELFIN RGILLVGAYL VLTNRGDMAG
GALMAFMMLG GRVAAPLVGL ARLLDDAGEV RTALAEAGTV LNQPTERLAM TTGLRPRIRG
ALSFADVSFS YPGATTRALA DVSFEVPAGS MLGLVGRSGS GKSTITRLLQ GVSRSYTGYL
KLDGVDLREI NLVHLRRSFG VVLQDNFLFR GTVRDNITAG RPGLTLDDVV RAARLAGAEE
FIERMPAGYE TWIEEGSTNI SGGQRQRLAI ARALICDPRL LILDEATSAL DPESEAVVNA
NLQRIARGRT MVIVSHRLSS LVDCDQICVM DQGRVADIGP HAALLDRCAI YRTLWFQQNR
HEARGREPAH PAAMLAEGQE A