| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2868 |
|---|
| Symbol | |
|---|
| ID | 6976300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3135577 |
|---|
| End bp | 3136314 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643392376 |
|---|
| Product | outer membrane chaperone Skp (OmpH) |
|---|
| Protein accession | YP_002277214 |
|---|
| Protein GI | 209544985 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2825] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.07447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.298059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC TTGGCCGGCG GATTCTGGCC GGCCTGTGCG TCGCGGCCGC GATGGGCGCG
GGCCTGGCGC CCGCCGCTGC GCCGGCCGCC CCCGCCCCGG CCGCGGCCAG CCAGGACGGT
GTGGCCGGCG GTGGGCCCCC GCCCGTGCTG CCGGCCCCCC CGGTGCCCGA TTTCGGCCCG
CTGCCCGCGG GCGCCCGCCC GCCGCAGCCG GTGATCGGCG TGTTCGATAC CAACGAGATC
ATGCGCCAGT CCGTCGCCGT CCAGCAGGTC GAGCAGGAAA TGGGAACCCG GCGCGAGGCG
CTGATCCACG ATGTCCGAGC CGAGGAGGAA CAGATCCAGG CCCTGCGCCA GCGCATGCTG
AATGCCCCCC GCGACCAGGC CGAGGCCCAG CAGCGCGCGC TGCAGCAGCG CCTGGCGGCC
GACCGGCAGA AATTCGGCAA CCGCAACCGT ATCCTGCAGG AAGACACCCA GATCGCGCTG
AACCAGGTCC AGCGCGAGGT GGACCAGGTT CTGGCCACGG TGGCGAAGTC GCGCGGACTG
ACGATCGTGG TGCAGTCCAG CGGCACGGTC CTGCATGGGC CGCAGGTCGA TATCAGCGAG
CAGGTTGCCA GCCGGCTGAA CGCCGTGCTG CCGCATGTCT ACCTGCCCGC GGCGAACGAG
GACCCGGAAG TGATCGCGAA ATCGGGCAAG TTCCCCACCG CGCCCGTGCA GATGACCGAC
CCGAACCAGC AGGGGTAA
|
|---|
| Protein sequence | MTPLGRRILA GLCVAAAMGA GLAPAAAPAA PAPAAASQDG VAGGGPPPVL PAPPVPDFGP
LPAGARPPQP VIGVFDTNEI MRQSVAVQQV EQEMGTRREA LIHDVRAEEE QIQALRQRML
NAPRDQAEAQ QRALQQRLAA DRQKFGNRNR ILQEDTQIAL NQVQREVDQV LATVAKSRGL
TIVVQSSGTV LHGPQVDISE QVASRLNAVL PHVYLPAANE DPEVIAKSGK FPTAPVQMTD
PNQQG
|
|---|
| |