| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2833 |
|---|
| Symbol | |
|---|
| ID | 6976264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3097456 |
|---|
| End bp | 3098658 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643392341 |
|---|
| Product | conjugation TrbI family protein |
|---|
| Protein accession | YP_002277180 |
|---|
| Protein GI | 209544951 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG AGCCGGAAGA ACAACAGCCG GCGCCGACGC CGGTCGTGCC GCCCGACCTG
CGGCTCAGGG GCGAACGACC GCGCGTCACG CGTCTCTCTC GCAAGGTGCT GATCACGCTC
GGAGGGGTGT CTGCGCTCAC CGTGGCCGGC GCACTTGGCT ACGCGCTTCA GACCCACAAC
AAGGGACAGT CCGGCCAAGA GCTGCTCAGC ACCCAGAACC GCCCCTCAGC CGAGGGGCTG
GCTGGCCTGC CAAAGGACTA CACGGGCCTG CCGCGCCAGG CGCCCCCGCT CGGGCCGCCG
CTGCCTGGCG ATCTTGGCAA GCCGATCTTG AACGCCGGCG CGGCGCCCAA CACCACGGTC
CCAGCGACCA CGCCCGATCC GGCGGCGCAG CGCCTTGCCC AAGAGACCGA GGCGGCGCGT
GTCAGCCGCC TGTTTGCGCA GACCAACGAG CAACCCCAGC CAGTCGGCCT CGTCACGCCT
CCGGCGGCGG GGACGCAGAG CGGGCCATCG CCCGCGCCGC CCGTCGACGC CGGCTCCGCG
CAGAACATGC AGGACCGCAA GACCGCGTTC CTCAACACCA CGCCGGACAA GCGGACGGTC
AGTCTCGACC GTCTCGAAGC CAAGGCTTCG CCCTATGTCG TGCAGGCAGG AACGGTGATC
CCGGCGGCGC TCATCACGGG CATCCGTTCC GACCTTCCCG GCCAAATCAC CGCCCAAGTG
ACCGAGCCCA TCTATGATTC TCCGACCGGC CAATACCTGC TGATCCCGCA GGGGGCGAAG
CTGATCGGCC AGTACGACAG CTCGGTCGCC TTCGGCCAGA GCCGCATCCT CCTTGTCTGG
ACACGCATCA TTATGCCGGA CGGCAATTCG ATCGTGCTGG AGCGCCAGCC TGGCGCTGAC
ACGCAGGGCT ATGCCGGCCT CGAGGACGAA GTCGACAACC ATTGGGGCAT GCTCTTTAAG
GCGGCAGTGC TCTCGACTTT GCTCAGCGTC GGCGCTGAGG CGGGCACGAG CCAGGACGAG
AACAACCTGG TGCAGGCGAT CCGGAGCGGC GCGTCGAACA GTATCAGTCA GACCGGCCAG
CAGATCGTGC AGCGCCAGCT CAACATCCAG CCGACGCTGA CGATCCGCCC GGGCTTCCCG
GTGCGCGTGA TCGTCACGCG CGACCTGGTG CTCGCGCCGT ACGACCAAGG AGGGAGGCCA
TGA
|
|---|
| Protein sequence | MTDEPEEQQP APTPVVPPDL RLRGERPRVT RLSRKVLITL GGVSALTVAG ALGYALQTHN
KGQSGQELLS TQNRPSAEGL AGLPKDYTGL PRQAPPLGPP LPGDLGKPIL NAGAAPNTTV
PATTPDPAAQ RLAQETEAAR VSRLFAQTNE QPQPVGLVTP PAAGTQSGPS PAPPVDAGSA
QNMQDRKTAF LNTTPDKRTV SLDRLEAKAS PYVVQAGTVI PAALITGIRS DLPGQITAQV
TEPIYDSPTG QYLLIPQGAK LIGQYDSSVA FGQSRILLVW TRIIMPDGNS IVLERQPGAD
TQGYAGLEDE VDNHWGMLFK AAVLSTLLSV GAEAGTSQDE NNLVQAIRSG ASNSISQTGQ
QIVQRQLNIQ PTLTIRPGFP VRVIVTRDLV LAPYDQGGRP
|
|---|
| |