| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2831 |
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| Symbol | |
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| ID | 6976262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3095700 |
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| End bp | 3096389 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643392339 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_002277178 |
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| Protein GI | 209544949 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.571124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT TCCGCCGCGC GTCGGTCCGC TACGGCCGCA CACCTGAGCC TGAAACCCCA
TACCAGCGCG CCGCCCAGGC TTGGGACGAT CGCATCGGCT CGGCCCGCGT GCAGGCGAAG
AACTGGCGGC TGATGGCCTT CGGCTCGCTG GCGCTCTCCC TGGGCTTGGC TGGCGGTCTC
GTCTGGCAAT CGACCAATGG CAGCATCGTC CCCTGGGTGG TGCAAGTCGA CAAGCTCGGC
CAGGCCCAAG CCGTCGCACC CGCGACCGCG GACTACGCGC CCAGCGATCC GGAAATCGCC
TGGTATCTCG CCCATTTCAT CCAGATCGTC CGTTCGCTGC CGGCCGATCC GATCATCGTG
CGGCAGAACT GGCTCCAGGC CTACGACTTC ACCACCACCT CGGGTTCGCA GGCGCTCAAC
GACTATGCCC GCGCCAATGA TCCGTTCGCC AAGCTGGGCC ATCAGCAGAT CGCCATCGAC
GTCTCGAGCG TGATCCGCGC CTCACCGTCG AGCTTCCGGG TCGAATGGGT CGAGCACCGC
TATCAGGACG GCGCGCTCGC CGACACCTCG CGCTGGACAG CCATTCTCAC CGTGGCGATC
CAGCCGCCGA CCACCGCCGA CGCGCTCCGC AAGAACCCGC TCGGCATCTA CGTCACCGCC
ATCAACTGGT CGAAGGAGCT GGGACAATGA
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| Protein sequence | MAIFRRASVR YGRTPEPETP YQRAAQAWDD RIGSARVQAK NWRLMAFGSL ALSLGLAGGL
VWQSTNGSIV PWVVQVDKLG QAQAVAPATA DYAPSDPEIA WYLAHFIQIV RSLPADPIIV
RQNWLQAYDF TTTSGSQALN DYARANDPFA KLGHQQIAID VSSVIRASPS SFRVEWVEHR
YQDGALADTS RWTAILTVAI QPPTTADALR KNPLGIYVTA INWSKELGQ
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