| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2830 |
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| Symbol | |
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| ID | 6976261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3094333 |
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| End bp | 3095697 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643392338 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_002277177 |
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| Protein GI | 209544948 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.216703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG TCGGCGTCAT CGATACCTTT CTCAACACCT TCACCACCTA CATCGATTCC
GGATTCGGGC TAATCAAGGG CGAGGTCGGC TATCTTTCCT CCACCCTGAT CGTCATCGAC
ATCACGCTCG CCGGTCTATT CTGGGCCTGG GGCGCCGACG AGGACATCCT CCAGCGCCTG
GTCAAGAAGA CACTCTACAT CGGCTTCTTC GCCTTCATCA TCACCAACTT CAATAATCTC
TCGGCCATCG TCTTCAACAG CTTCGCCGGC CTCGGTCTGA AGGCGGGCGG TTCGTCGATC
TCGACCGCCG ACTTCCTGCG GCCGGGCAAA CTCGCCCAGG TCGGGCTCGA CGCCGGTCAG
CCGCTGCTCG ACGCCGCCAG CCAGATGATG GGTTTCACCA GCTTCTTCGC GAACTTCGTG
CAGATCGCGG TGCTGATGGT CTCCTGGCTG CTGGTGCTGA TCGCCTTCTT CATCCTCGCG
GTGCAGCTCT TCGTCACGCT GATCGAGTTC AAGCTGACGA CCCTCGCCGG CTTCATCCTC
ATTCCCTTCG CGCTCTTCAA CAAGACCGCG TTTCTCGCCG AGAAGGTGCT TGGCAACATC
GTGGCCTCCG GCGTGAAGGT GATGGTGCTG GCCGTCATCG TCGGCATCGG CACCGGGCTC
TTCTCGCAGT TCACCCAAAC CTATGCCGGC GGCCAGCCGA CGATCGAGCA GGCGCTCTCC
GTCGTGCTCG CGGCGCTCGC CATGCTCGGC CTCGGCATCT TTGGCCCAGG CATCGCTACG
GGCCTGGTCT CCGGCGCGCC GCAGCTCGGT GCGGGTGCCG CGGTCGGGAC TGGCCTTGCC
GTCGCCGGCA CGGCGATGGC CGGCGCCGGA GCGCTCGGCC TGGCCGGAAG GGGAGCGATG
GCGGCAGCCT CGGGCACGGC CGCCGCCGCC CGTGGCGGCG CGGCGATGGC TGGCGGCGCT
TCCTCCGCCT ACAGCGTGGC CTCGGCCGGC CGCTCCGGCG TCTCGGGCGT GGCCGCCGGT
CTTGGCGGGG TCGGCCGGGC CGCCGCGTCT TCAGCGGTAG CGCCTATTCG CCGTGCGGCG
GGCCGCGCCG CCGGCTCGAT GCGCGAAAGC TTCGCCGCCG GCGCCCGGTC CAGTTTCGCT
GCAACCGGCG GCTCATCCAC CCAAGGCACG GTCGGCGGCG CGCAGACTGC GGGCGGCAGC
GGCGCGACCG ATGCCGGCTC GAACCCGTCG GGGCCGCCCG CCTGGGCCCG TCGCATGAAG
CAGAACCAGT CGATGGCGCG CGGCGCGCAG ACCGCCGCCC AGGTTCTCAA GTCCGGCGAT
AGCCATGGCG GCGGCCATTC CGTCGATCTC TCGGGAGGAG AATGA
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| Protein sequence | MNNVGVIDTF LNTFTTYIDS GFGLIKGEVG YLSSTLIVID ITLAGLFWAW GADEDILQRL
VKKTLYIGFF AFIITNFNNL SAIVFNSFAG LGLKAGGSSI STADFLRPGK LAQVGLDAGQ
PLLDAASQMM GFTSFFANFV QIAVLMVSWL LVLIAFFILA VQLFVTLIEF KLTTLAGFIL
IPFALFNKTA FLAEKVLGNI VASGVKVMVL AVIVGIGTGL FSQFTQTYAG GQPTIEQALS
VVLAALAMLG LGIFGPGIAT GLVSGAPQLG AGAAVGTGLA VAGTAMAGAG ALGLAGRGAM
AAASGTAAAA RGGAAMAGGA SSAYSVASAG RSGVSGVAAG LGGVGRAAAS SAVAPIRRAA
GRAAGSMRES FAAGARSSFA ATGGSSTQGT VGGAQTAGGS GATDAGSNPS GPPAWARRMK
QNQSMARGAQ TAAQVLKSGD SHGGGHSVDL SGGE
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