Gene Gdia_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2825 
Symbol 
ID6976256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp3090201 
End bp3090542 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content66% 
IMG OID643392333 
ProductConjugal transfer protein TrbC 
Protein accessionYP_002277172 
Protein GI209544943 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3838] Type IV secretory pathway, VirB2 components (pilins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTG TTCTCGCCAC CGCCCGCCGG ATGCACCGGC GCGCCCTCGA CGTCATCACC 
TTCGCTGCGC TCTCGCTGGC CTTCGCTCCG GCGGCCTATG CCTCTGGCTC CTCCATGCCG
TGGGAGACGC CGCTCAACTC CATCCTGGAG TCGGTGCAAG GCCCGGTCGC GAAGATCATC
TCGGTGATCA TCATCACGGT GACCGGCCTG ACCCTCGCCT TCGGCGACAC CTCCGGCGGC
TTCCGCCGGC TGATCCAGAT CGTGTTCGGC CTCTCGATCG CCTTCGCCGC GTCGAGCTTC
TTCCTGTCCT TCTTCAGCTT CTCCGGCGGA GCGCTGATCT GA
 
Protein sequence
MIRVLATARR MHRRALDVIT FAALSLAFAP AAYASGSSMP WETPLNSILE SVQGPVAKII 
SVIIITVTGL TLAFGDTSGG FRRLIQIVFG LSIAFAASSF FLSFFSFSGG ALI