| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2818 |
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| Symbol | |
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| ID | 6976249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 3083429 |
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| End bp | 3085411 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643392326 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_002277165 |
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| Protein GI | 209544936 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.443273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCGA CCAAAATTCT CTGGGGTCAG ATCATCACCG TCTTCGCCAT CGTCTTGCTG
GCGACCTGGA TCGCGACCGA ATGGACTGCC TGGCGGCTCG GCTTCCAGCC CGAGCTGGGA
CGGCCCTGGT TCGAGGTCCT GCACTTCCCG TTCTATCTGC CGCCGGCGTT CTTCTGGTGG
TGGTACGCCT ACGATGCTTA TGCGCCATCG ATCTTCATCG AGGGCGCATA CATCGCCTCA
TCCGGCGGTC TCATCGCCGC GGCGGTGGCC ATCGGCATGT CCGTCTGGCG CGCCCGCGAG
GCCGAGAACA TCGCGACCTA TGGCTCCGCG CGTTGGGCGC AGCCGCAGGA GATCGCTGAA
GCTGGCCTCC TCGGTTCCGA CGGCGTGGTG CTGGGCCGTC ATCAGCGCAG CTATCTCCGC
CATGACGGTC CCGAGCATGT CCTGTGCTTC GCCCCGACCC GCAGCGGCAA GGGCGTCGGC
CTCGTCATCC CATCGCTGCT GACCTGGCCG GGCTCGGCGA TCGTCCACGA CATCAAGGGT
GAGAACTGGC AGCTCACCGC GGGCTTTCGC GCGCAGCACG GCCGCGTCCT CCTGTTCGAT
CCGACCAACG CAAAATCGTC GGCCTACAAT CCGCTACTCG AGGTGCGCCG CGGCGAGTGG
GAGGTCCGCG ACGTCCAAAA CATCGCCGAC ATCCTGGTCG ACCCGGAAGG CAGTCTCGAA
AAGCGGAACC ATTGGGAGAA GACCAGCCAC GCGCTGCTGG TCGGCGCGAT CCTTCATGTC
CTCTACGCCG AGGAGGACAA GACCCTCGCT GGCGTCGCGT CCTTCCTCTC TGATCCGAAG
CGGCCAATCG AGTCGACACT GTCGGCGATG ATGCGGACGC CGCACCTCGG CGAGGCCGGC
GTCCATCCCG TCGTCGCCTC CGCAGCGCGC GAGTTGCTGA ACAAGTCCGG CAACGAGCGG
TCCGGCGTGC TGAGCACGGC CATGTCGTTC CTCGGCCTCT ACCGCGATCC CGTGGTGGCC
GAGGTGACGC GGCGCTGCGA CTGGCGGATC GGCGACATCG TGGCCGGTGA CTGGCCGACC
ACGCTGTACC TCGTCGTGCC ACCGTCTGAC ATCAACCGGA CCAAGCCGCT CATCCGCCTC
ATCCTCAACC AGGTCGGCCG GCGGCTGACC GAGGACCTGC AGGCCAAAGC TGGGCGACGC
CGACTGCTCC TCATGCTCGA CGAGTTCCCG GCGCTCGGCC GCCTCGACTT CTTCGAGTCC
GCGCTAGCCT TCATGGCCGG CTACGGCATC AAGAGCTTCC TGATCGCCCA GTCGCTGAAC
CAGATCGAGA AGGCCTACGG TCCAAACAAC TCGATCCTCG ACAACTGCCA TGTGCGGGTC
AGCTTCGCGA CCAACGACGA GCGGACGGCG AAGCGAGTCA GCGACGCGCT CGGCACGGCG
ACCGAGATGA AGGCGATGAA GAACTATGCC GGTAGCCGGC TGTCGCCGTG GCTGGGGCAC
CTCATGGTCT CGCGCTCGGA GACCGCGCGC CCGCTGCTGA CGCCTGGCGA GGTGATGCAG
CTCCCGCCGA CCGACGAGAT TGTCATGGTG TCGGGGGTCC ATCCGATCCG CGCGAAGAAG
GCGCGCTACT ACGAGGACGA ACGCCTTCAG GAGCGCATCA TGGCGCCTCC GGTGCTGGCG
CGTCCGAAAG AGGTGCGCCC CGACGATTGG AGTTCGCGCC CGTTGCCGCC TCGACCACCG
GCGCCGGCTG GGGTCGATGA CGAGGACGCC GACGACGAGG ACCCGAAGAA CACCGACCGC
CGGAAGCAGC CCGAACTCAG TCAAGGCACC GTCGAGAAGC AAGCACCGAT CGAGAATGAG
TTCGCGCTCG ACCCGGTCGA CGACATGGAG GAGGACGCAC CCCGCATCGG CCGGATGAAC
GACCTCATGC AGGGCCTCGC CCAGCAGGCT TCGCTTGATC CGGGCGACGA CCTCGGGATG
TGA
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| Protein sequence | MPATKILWGQ IITVFAIVLL ATWIATEWTA WRLGFQPELG RPWFEVLHFP FYLPPAFFWW
WYAYDAYAPS IFIEGAYIAS SGGLIAAAVA IGMSVWRARE AENIATYGSA RWAQPQEIAE
AGLLGSDGVV LGRHQRSYLR HDGPEHVLCF APTRSGKGVG LVIPSLLTWP GSAIVHDIKG
ENWQLTAGFR AQHGRVLLFD PTNAKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE
KRNHWEKTSH ALLVGAILHV LYAEEDKTLA GVASFLSDPK RPIESTLSAM MRTPHLGEAG
VHPVVASAAR ELLNKSGNER SGVLSTAMSF LGLYRDPVVA EVTRRCDWRI GDIVAGDWPT
TLYLVVPPSD INRTKPLIRL ILNQVGRRLT EDLQAKAGRR RLLLMLDEFP ALGRLDFFES
ALAFMAGYGI KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFATNDERTA KRVSDALGTA
TEMKAMKNYA GSRLSPWLGH LMVSRSETAR PLLTPGEVMQ LPPTDEIVMV SGVHPIRAKK
ARYYEDERLQ ERIMAPPVLA RPKEVRPDDW SSRPLPPRPP APAGVDDEDA DDEDPKNTDR
RKQPELSQGT VEKQAPIENE FALDPVDDME EDAPRIGRMN DLMQGLAQQA SLDPGDDLGM
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