| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2813 |
|---|
| Symbol | |
|---|
| ID | 6976244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 3079700 |
|---|
| End bp | 3080605 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643392321 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002277160 |
|---|
| Protein GI | 209544931 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG ACCCGCTTGC TGAGATCGTC ACCTTGCTTC AGCCCTCCGC GAGCTATTCC
AAGCTGGTCG AATATGCAGG CCGATGGCGC CTCCGCCGCG ACATCGAGGG CAAGCCAGTG
TTCTTCGCGG TGCTGGAGGG CGCGTGTCGG GTGGTATCGT CCGGCCGCCC GCCGATCATC
GCGCGCCAGG GCGATTTCGT GCTGTCGCCC GTCACCAAGG ACCATGTCGT CGAGAGCATC
GAGGCGCCAC CGCACGGGAT CGCGATGACG CCGACGGAGA CCGGTGAGGG GCGGTTCCGG
GTCGGGGAGC CCGGCGAGCC GGTCAATCTC AGAATGCAGG TCGGGGTCTG CAGCTTCGCC
TCGCCCGATG CCGCCCTGCT CGTCTCGCTG CTGCCGGCGA TGATCGTCGC CCGCGACGAG
CCGCGGCTTG CCCTGCTGCT TCAATTGGTG GGCGATGAGA CGCGCCATGC CCGACCGGCG
CGGGAGCTGG TGCTGGAGCG TCTACTCGAG GTGCTGCTGA TCGAGGCGCT GCGGTGCGGG
GCCGATACCC TGTCGGTGCC AAGCCTCGCG CGGGGGCTAT CGGACGATCG CTTGGTGTTC
GCCTTGCGGG CCATGCATGC GCGGCCCGCG CACGGCTGGA CCGTGGCCGA TCTCGCCGCC
GAGGCGGCGA TGTCGCGGTC CGCCTTCTTT GCGCGCTTCA GCCGCGTCGT CGGGTTGCCG
CCGATCGAAT ATCTGCTGAC CTGGCGCATG GCGCTCGCCA AGCGGTTGCT ACGCACACGG
GAGCTGGCGA TCGAGCACGT CGCCGCGCAA GTCGGCTACG CCTCTGCGAG CACGTTCAGC
ACCGCCTTCG CCCGTCATGT CGGGATGCCG CCGATACGAT ATGCCCGGGC GATGCTCCCA
GCCTAG
|
|---|
| Protein sequence | MTIDPLAEIV TLLQPSASYS KLVEYAGRWR LRRDIEGKPV FFAVLEGACR VVSSGRPPII
ARQGDFVLSP VTKDHVVESI EAPPHGIAMT PTETGEGRFR VGEPGEPVNL RMQVGVCSFA
SPDAALLVSL LPAMIVARDE PRLALLLQLV GDETRHARPA RELVLERLLE VLLIEALRCG
ADTLSVPSLA RGLSDDRLVF ALRAMHARPA HGWTVADLAA EAAMSRSAFF ARFSRVVGLP
PIEYLLTWRM ALAKRLLRTR ELAIEHVAAQ VGYASASTFS TAFARHVGMP PIRYARAMLP
A
|
|---|
| |