| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2757 |
|---|
| Symbol | |
|---|
| ID | 6976187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 3029211 |
|---|
| End bp | 3030176 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643392265 |
|---|
| Product | RNA methyltransferase, TrmH family, group 3 |
|---|
| Protein accession | YP_002277105 |
|---|
| Protein GI | 209544876 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.611419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGC CCTGTCTCCA TATCGTGTCG CAACGGCGTG ACGGGGGCGG TGGTTCGGCC
TATATCGGGG CCATGCGCAC CCGCCCCCCG CGTCGTCCCG ACGCACGATC CACCCCGCGT
TCGCCCGGTC GGGCGGACCA GAATGCCCCC CACGACGCGG GCTCGACCCC GGCCTCGGGT
ACATCCCCGG GCGCGGCCCC GGGCCGCCAG GGGCGGCGCG GCGGCGGCGC GGCGCGCGGC
GGCCCCCCGC GTGGCACCTA CTGGCTGTAC GGGCTGCATC CCGCGCTGGC GGCGCTGGGC
AACCCGGAAC GCCGCATCCG CCAGATCCTG GCGACCGAGG ACGGCGAGGC CGCGCTGCGC
GAGCGCCTGA ATGCTCCCCT GCCGATGCAG CCCCACCGCA CCGATCGCGC CCGGCTGGAA
TCGCTGTGCG GGCGCGACGC CGTTCACCAG GGAATCGCGG TCCTGGCCGA TGCGCTGCCG
TCGCTGGCGA TCGAGGACAT GACCGGGCGG CCCGGCCCCC TTCTGCTGCT GGACCAGGTG
ACCGATCCGC GCAATGTCGG CGCCATCCTG CGCTCCGCCG CCGCCTTCGG CGCCGCCGCC
GTGGTGGTGA TGGAACGCAA CGCGCCGGAC GAGACCGGTG CCCTGGCCAA GGCCGCGTCG
GGGGCGCTGG AAATCGTGCC GCTGGTGCGG GTGGTGAACC TGGCCCGCAC GCTGGACGCG
CTGAAGAGCC TGGATTTCTG GGTCGTGGGG CTGGATGCCG GCGGCGGAAT CCTGGACGGC
ACCAGTTTCG GCCAGCGGCG GGTGGCGCTG GTACTGGGCG CCGAGGGCGA CGGGCTGCGC
CGCCTGACCC GCGAGCATTG CGACGAAATC GCCGGACTGG CGATGCCCGG CGACATGGAA
AGCCTGAACG TCTCCAACGC CGCCGCCGTC GCCCTGTACG AACTGGTACG GCGCGGAAAG
GCATAA
|
|---|
| Protein sequence | MSMPCLHIVS QRRDGGGGSA YIGAMRTRPP RRPDARSTPR SPGRADQNAP HDAGSTPASG
TSPGAAPGRQ GRRGGGAARG GPPRGTYWLY GLHPALAALG NPERRIRQIL ATEDGEAALR
ERLNAPLPMQ PHRTDRARLE SLCGRDAVHQ GIAVLADALP SLAIEDMTGR PGPLLLLDQV
TDPRNVGAIL RSAAAFGAAA VVVMERNAPD ETGALAKAAS GALEIVPLVR VVNLARTLDA
LKSLDFWVVG LDAGGGILDG TSFGQRRVAL VLGAEGDGLR RLTREHCDEI AGLAMPGDME
SLNVSNAAAV ALYELVRRGK A
|
|---|
| |