| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2718 |
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| Symbol | |
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| ID | 6976149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2991989 |
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| End bp | 2993584 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643392230 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002277070 |
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| Protein GI | 209544841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTGC GATCGCTGCG CCGGACTGTC ATGTCCGGGG GGGCGATGCT GTCGCTGGCG
GCGTTGTCCG CCTGCGACCT GGCGCCCACC TATCACCCAC CCACCTATGT CGTGCCTGCG
TCTTGGCACG GGCAGGCGCC GTTCGCCACC GCCACGCCGG CCGATACCCA GTTGCCGTCC
AACTGGTGGA CCATGCTGCA TGATCCGCAG CTCGACGCGC TGGAAGACAA GGCCACGGCC
GCGAACGCGG ACCTGCAGGC CGCGGCCGAA CGCTTCGTCC AGGCCCGCGC CATGGTCATG
CAGGCCCGTG CGGACCTGCT GCCGCATTTC GGCCTGGCCT TCGGCGCGTC GGACAACAAG
CAGTCGGCGG ACCGCCTGTT CCGCTACAAG GGCGCCACCA CCGCGACTGA CGAGTTCTAT
GGCGGCCTGG CGTCGTGGGA GCCCGACTTC TGGTCGGAGA TCCGCAACCA GGTGCGCATG
GCGAAATATT CCGCCCAGGA GAAGGCGGCG GATTTCGCCG CCGCGCGGCT GAGCCTGCAG
GCGGAACTGG CCAACGATTA CGTGGCCCTG CGCGGCTATG ACGCGCAGGA TGCGATCTAT
CGCAAGTCCA TCGCCTATTA CGAACGCGCG GTATCGGTCA CGCAGACGCA GCTGGCCAAC
CAGGCGGCGC CCAAGCTGGA CCTGGCCCGT GCGCAGAACC GTCTGTACGT CACCCAGGCG
GCGGAGATGG ACATCCTGGC CGAGCGCGAG GTGACCGAGC ATGCGATCGC GGTGCTGACC
AACAGCGCGC CGTCCAGCTT CCATATCGCG CCGGTCGATA CGCTGACCTT CACGCGGGCG
GCTATTCCGG TGGGCGTGCC GTCCGACCTG CTGCAGCGGC GCCCGGATAT CGCGGCGGCG
GAACGGCAGA TGGCGCAGGC CAACCGCAGC ATCGGCGTGT CGCGCGCGGC ATTCTATCCG
CATATCTCGC TCAACGCGAA TGGCGGCTTC GACGCCAACG GGTTCGACCT GGCCAACCTG
GCGAACAGCA TGTGGTCGTA CGGCGCGTCG GCGTCGATGC CGATCTTCGA GGGCGGGCTG
CGCCGCGCGG CGCTGCAGGC CTCGTGGTCC ACCTATCGCG AGACGCGCGA CCATTACCGG
TCCTCGGTCC TTTCGGCGTT TCGCGAGGTC GAGGACGGGC TGTCGCGCAC CGACCGGCTG
TGGGCGGAAA ACGACCGCCT GAAGGCGGCG GTGTCGGCCG CGCTGGACAT GCAGAACATG
ACGATGACCC TGTACAAGGG CGGCCTGTCG GCCTATCTGG ACGCGATCAT CGCGCAGGAG
GCGGCGCTGG ACGCGCAGAT TTCGCAGGTG CAGGTCGAAA CCCGCTATGT CCAGGCGGAG
GTGGGCCTGA TCCGCGCGCT GGGCGGCGGC TGGAACGACA GGCTGCTGCC GACGCCCGAC
CAGACGATGA CGTTCTCGAT CCTGCAATAT GACGGGCTGC ACCACCCCAC GCCCGCCGGC
GGCATCGACA CGCCGGGCGA CACCGATACG CGCTATGACG ACCTGACGGG CGCGACGACG
CTGCGCACGG GGACGGTCCC GGTTTCGGGA CGGTGA
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| Protein sequence | MIVRSLRRTV MSGGAMLSLA ALSACDLAPT YHPPTYVVPA SWHGQAPFAT ATPADTQLPS
NWWTMLHDPQ LDALEDKATA ANADLQAAAE RFVQARAMVM QARADLLPHF GLAFGASDNK
QSADRLFRYK GATTATDEFY GGLASWEPDF WSEIRNQVRM AKYSAQEKAA DFAAARLSLQ
AELANDYVAL RGYDAQDAIY RKSIAYYERA VSVTQTQLAN QAAPKLDLAR AQNRLYVTQA
AEMDILAERE VTEHAIAVLT NSAPSSFHIA PVDTLTFTRA AIPVGVPSDL LQRRPDIAAA
ERQMAQANRS IGVSRAAFYP HISLNANGGF DANGFDLANL ANSMWSYGAS ASMPIFEGGL
RRAALQASWS TYRETRDHYR SSVLSAFREV EDGLSRTDRL WAENDRLKAA VSAALDMQNM
TMTLYKGGLS AYLDAIIAQE AALDAQISQV QVETRYVQAE VGLIRALGGG WNDRLLPTPD
QTMTFSILQY DGLHHPTPAG GIDTPGDTDT RYDDLTGATT LRTGTVPVSG R
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