| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2710 |
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| Symbol | |
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| ID | 6976141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2978912 |
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| End bp | 2980810 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643392222 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002277062 |
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| Protein GI | 209544833 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0279303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACCGTC GATTCTGGAG GGGCGGCCGC CTGTGGGTTG GCGGCGCCAT CACCATTCTG
TTGTCCACCA CGATGGCCAC CGTCATCCTG GTCCATGCCC GTGATAATTT CATGCATACT
CGGCAGGACG TGGCGGGCCT GGAGGGGTTT CGCCCGGTCC TGGACGCCGC CAGCCTCATC
AGTGCCGAAC GGGCCCCTTC CACCATGCTG ATGGCGGACG AAACCGCCCC GGCCCGCGAC
AGGCTGCGCG CCGCGCGCGC CGCCACCGAC CAGGCCCTGG CACACGCCGC CGGCACCGTG
TCGTCCGCCG CCCTGCAGGA GACCCTGCGG CAGTTGGAGC AGGCCCGGAA CCTGGTCGAT
CGGGCCGCCG AGCGGCCGGA CCGGTATGAC GGCGTCCAGG GCGCGATCGA TGCGCTGTTC
GCCGCAGACG ATGCCTACTG GGCGATGATG ATACGGCAGT CCGCCACGCT CATCGGCTCC
GATCCCCGGC TGGCCGCCCC GATCCGGCAT GCGCTGATCC TGTGCGGCCT GCGCGACAAT
GCCGGGCGAC TGGGTTCGGT GATGCTGGCA CCGCTGATCG CACAGACCCC GATGCCGCCG
CGCAACGTCT CGGCCAGCGA CCGGCTGGCG GGCCGCATGG CCGTGGAATG GCAGTTGCTG
GAACTCAATC CCAGCGTTGC GGATCATGGA CCGCGCCTCG CCGCGCTGCG GCAGGATGCC
GAGCGGGCGT TCTTCGACGA CGGGCAGCCC CTGGTGGCCC GGATCATCGC CGAGGGCACC
CAGGGCACGC CCTATACGCA GACGGCCGTC GCCTTCGCCG ACCGGTATGC CCGGACGCTG
GCGCCGCTGG AAACCTGGCG GACGAACGAC CTGGACATCG TCCTGTCCGA CTTCAGGCGC
AAGGCGCGGC ACGCCTTCGA CATGCTCTGG ATCATCAGCG GCGCGACGCT GACCGTCACC
GGCCTGATCG CCGGCGGGGT GCTGCTGGTG CATCTGCGGG TGCTGGCCCC CCTGCTGGAA
GCCAGCGAGG CCGTCGTGGA CCTGGGCCAC GACGAACCCC TCCGCCTGCC CCGAAGGCAT
CGCGGCAGCC GGGAACTGCA GCCGCTGTAC GAAGCCCTGG AGATCCTGGA CGCCAGGCTG
CGCGAACGCG CGGCCCAGAC CCAGGCCCTG AAGCGTCAGG CCGAAACCGA CGAACTGACC
CAGCTCCTCA ACCGGCGGGC GCTCCAGATC CTGGCGAAAC CGAGGCTGGA GATCTCGGAA
GCGGACGAAC GCGCGTTTCT GATCCTGCTG GACATCGACC ATTTCAAATC CATCAACGAC
CGGCACGGCC ATACCGAAGG CGACCGGGTG CTGGTCGCGG TCGCCGCCGC CCTGCGCGAG
CAGGTGCGGC CGGACGACCT GGTCGCGCGC TTCGGCGGCG AGGAATTCGC CATCCTGATC
CGCGCGCACA CCCAGATGAC CGCCCTGTCC ATGGCGCATC GCCTGCGCCG GCGCCTGGGC
AGCCTCAAGG TCATCTCCGC CCAGAATGTC CGCATTCCCG TCACCGCCAG TTTCGGCGTC
GCGGCCGGCG ACAATCTGAC ATGGCGCCAG TTGGTGGCGA AGGCGGACGT CGCGCTGTAC
GCCGCCAAGC GGGCGGGCCG CAACACCGTC CGCCTGGCCG AACATGATGC CGAACCGGCC
GACGAAGGCA CGGCGTTACG GGAGGATTCT AGTCCCCGGC CTCCGGCCAG CCGCCGCCCG
TCGCCTTGCA CAGCGCCACC ACATCCAGCA GCACCGCCAG CCGCGCCTGG ATGTCGTCCT
GCCCCGCGCC ACCCAGCTCG GCCCGCGCAT CCAGCACCGC CAGCGCATCG CCGGTCCCGT
CGCGATAGCG GGTTCGGGCC AGGGCCAGCC GGTCGGTGA
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| Protein sequence | MHRRFWRGGR LWVGGAITIL LSTTMATVIL VHARDNFMHT RQDVAGLEGF RPVLDAASLI
SAERAPSTML MADETAPARD RLRAARAATD QALAHAAGTV SSAALQETLR QLEQARNLVD
RAAERPDRYD GVQGAIDALF AADDAYWAMM IRQSATLIGS DPRLAAPIRH ALILCGLRDN
AGRLGSVMLA PLIAQTPMPP RNVSASDRLA GRMAVEWQLL ELNPSVADHG PRLAALRQDA
ERAFFDDGQP LVARIIAEGT QGTPYTQTAV AFADRYARTL APLETWRTND LDIVLSDFRR
KARHAFDMLW IISGATLTVT GLIAGGVLLV HLRVLAPLLE ASEAVVDLGH DEPLRLPRRH
RGSRELQPLY EALEILDARL RERAAQTQAL KRQAETDELT QLLNRRALQI LAKPRLEISE
ADERAFLILL DIDHFKSIND RHGHTEGDRV LVAVAAALRE QVRPDDLVAR FGGEEFAILI
RAHTQMTALS MAHRLRRRLG SLKVISAQNV RIPVTASFGV AAGDNLTWRQ LVAKADVALY
AAKRAGRNTV RLAEHDAEPA DEGTALREDS SPRPPASRRP SPCTAPPHPA APPAAPGCRP
APRHPARPAH PAPPAHRRSR RDSGFGPGPA GR
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