| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2670 |
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| Symbol | |
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| ID | 6976100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2941156 |
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| End bp | 2942754 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392183 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002277024 |
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| Protein GI | 209544795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0133401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.268883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATAGGG GACATTCTTG GCGGGCGGCG ATCGTCGGGC TGTCGGTCCT TGCGACCGGA
TGCGCGGTCG GGCCGGACTT CCACAAGCCC GTGGCCTGGG CGCCGCCGCA CTGGGCGGGC
CAGCATTGGG TGGGTTCAGC CCCCGGGTCG ACCTCTGGGG CATCCAGGCC GCCTGTCAGC
AGCGATATCT CGGATGCCGC CCCCGACCCC GCATGGTGGG ACGTGTTCCA TGATCCCGAA
CTGTCGGCGC TGGAACGCCG GGTGGCCGGG CAGAACCTGT CCGTCGCCAT CGCCACCGCC
CGTCTGGCGC AGAGCCGGTC GCAACTGCGG ATTGCCGGGG CCGAGCGTTA TCCGGGGCTG
AGCGCCGCGG GGTCGTACAC CCGGTCGCAA TACAGCACCA AGGAATTGCA GCGGATCGTC
AGCGATGTCG GCAAGTCCGG CAACCTGCCG CTGGGCGGGG TCAACCTGGC GGACCAGTCC
GGGCAGTTCA CCATTCCGCT GCTGGACCAG TGGCGCGACA GCATCGACGC GACGTGGGAG
GTCGACCTGT GGGGCCGCGT GCGCCGGCAG TACGAGGCGG CGGGCGCCGA CCTGCAGGCC
TCGGTCGAGG AACGGCGCGG CGTGCTGACC GCGCAGATGG CCGAACTGGC CCGCGATTAC
GTGGCCCTGC GCGAGGCCCA GGCGCAACTG CGCATCCTGC TGGACAATCG CGACACCGCG
TCCCGCTCGC TGGACCTCAG CCGCCAGCGC AACCAGGCGG GCCTGGTCAG CGAACTGGAC
GTGCAGAGCG CGCAGTCGCA ACTGGATTCC GTCACCGCGC GCATTCCGCA GATGGAACAG
CAGATCGCGC TGCAGGTGAA CGCGCTGAGC CTGCTGCTGG GGGCGCCGCC GTCCGCCCTG
GCCGGCGAAC TGCTGACCGA CCGTGACATT CCGCCCGTGC CGCCGCGCGT GCCGGCCGGC
GTGCCGTCCG AACTGGCCCG CCGCCGCCCA GACATCCGCC AGGCCGAGGC GCAGCTTCAT
GCCGCCACCG CGCAGGTGGG CGAGGCAGTG GCCGAGTTCT ATCCCCGCGT GACCATCGAC
GCCGGATTCG GCTTCCAGTC GCTGTCCTTC CGCGATTTCG GATTCTGGAA TGCCCGGGCG
TGGAATGTCG GCCCGTCGAT CAGCCTGCCG ATCTTCCAGG GCGGGCGGCT GCGCGGGCAG
CTTGAGTTGC GCCACGCGGC GGAGCAGGAG GCCGCGATCA CCTATCGCCG GACCGTGCTG
GGCGCCTGGC ACGAGGTCGA CAACGCCCTG ACCGCGTATC GTGACGAACA GATGCGCCAT
GACAGCCTGG CGCGGCAGGT GGCCGACGAC CAGCGGTCGC TGGACCTGGC CCGCGACCAG
TATCGCCACG GCATGGTGAC GTTCCTGACG GTGCTGGATG CCGAACGCCG GGTGCTGGGG
TCGCAGACCG ACCTGACCAG CAGCACGGCC AGCCTGTCGA CCGATCTGGT GCAGCTCTAT
TCCGCGCTGG GCGGCGGGTG GGAAAATACC TTCCCGGTCC AGATGGCGGC CCCGGCCCGC
CTGGCCGGTG CCGCGCCCGG CGCGGCCCCC CCGGCATGA
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| Protein sequence | MHRGHSWRAA IVGLSVLATG CAVGPDFHKP VAWAPPHWAG QHWVGSAPGS TSGASRPPVS
SDISDAAPDP AWWDVFHDPE LSALERRVAG QNLSVAIATA RLAQSRSQLR IAGAERYPGL
SAAGSYTRSQ YSTKELQRIV SDVGKSGNLP LGGVNLADQS GQFTIPLLDQ WRDSIDATWE
VDLWGRVRRQ YEAAGADLQA SVEERRGVLT AQMAELARDY VALREAQAQL RILLDNRDTA
SRSLDLSRQR NQAGLVSELD VQSAQSQLDS VTARIPQMEQ QIALQVNALS LLLGAPPSAL
AGELLTDRDI PPVPPRVPAG VPSELARRRP DIRQAEAQLH AATAQVGEAV AEFYPRVTID
AGFGFQSLSF RDFGFWNARA WNVGPSISLP IFQGGRLRGQ LELRHAAEQE AAITYRRTVL
GAWHEVDNAL TAYRDEQMRH DSLARQVADD QRSLDLARDQ YRHGMVTFLT VLDAERRVLG
SQTDLTSSTA SLSTDLVQLY SALGGGWENT FPVQMAAPAR LAGAAPGAAP PA
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