Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2669 |
Symbol | |
ID | 6976099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 2940289 |
End bp | 2940969 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643392182 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002277023 |
Protein GI | 209544794 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00411812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.199475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCG CCCCGCCCCC CACCGCGCCG GACCTGCCGG GGGCATCGGC CGCCAAGCGG CAGCAGATCC TGGAAGGCGC CGGGCGAATC TTCGCGGCGC ATGGATACGA GGGCGCCAGC ATGTCGCAGA TCGCGCGGGG TGCCGGCGTG TCGAAGGGAA CGCTGTATAA TTACTTCGAC AGCAAGGCGA CCCTGTTCGC CGCCTTCATC CAGCAATGCG CGTGCGAGAA GCTGCCCAGG CTGTTCGAGA CGATCGGCGA GGAACGCACG CCCGAGGACA CGCTGGTCGG CATCGCCACC GCGATGATCC ACCTGACCAC CTCGCCCCTG TCGCTGATGC TGAACCGCAT CATCGTGTCC GAGGCCGCGA CCTTTCCGCA CCTGGCGGAA ACCTTCTGGC AGGTCGGGCC GCAGAAGGCG ATCGGCATCC TGGCCGACTG GCTGACCGCC CGCACGCGCG AGGGCACGCT GACAGTGCCC GACCCGGTCC TGGCGGCGGA ACTGTTCTAT ACGCTGTGCC AGACCCGCAT CACCGGGCGG AAGCGGATGC AACTGCCCGT CGATTCCGAC CCCGACCACA TCGCCCTGAT CGCCCGGGCG GTGACGCGCA TGTTCCTGAA CACGTTCCAG ACCGGCAAGG GGCCACCTGT CCCCGAGCCG CACCCACACG TCACGGCTTG A
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Protein sequence | MPAAPPPTAP DLPGASAAKR QQILEGAGRI FAAHGYEGAS MSQIARGAGV SKGTLYNYFD SKATLFAAFI QQCACEKLPR LFETIGEERT PEDTLVGIAT AMIHLTTSPL SLMLNRIIVS EAATFPHLAE TFWQVGPQKA IGILADWLTA RTREGTLTVP DPVLAAELFY TLCQTRITGR KRMQLPVDSD PDHIALIARA VTRMFLNTFQ TGKGPPVPEP HPHVTA
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