| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2601 |
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| Symbol | |
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| ID | 6976031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2863958 |
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| End bp | 2865280 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643392117 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002276958 |
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| Protein GI | 209544729 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACG GTATCGAACA GGCATCGAAA GCAGGAACCG CCCCGGGCGC GGGCATGGAC
CGCCGTGTCG CGCCGTCACG CGCGCGGCGG CTGAAGCCCT GGCTGAAATA CGGCGCCGCC
GCGCTGGCGC TGGTGGCGGC CACGGCCGCG TGGCGCATGG TCCCGGCGTC AGGCACGCTG
GCGGTCGGCG CGGACACCGT GACGATCGAC CCCGTGCGCA CCGCCGCCTT CCTGGACTAC
CTGCCGGTGC GCGCGACGGT GGCGCCGCTG CACGTGGTGC TGCTGGGCGC GGTGCAGGGC
GGACAGGTGG CCTCGGTCGC GGTGCAGGAC GGCGCGCTGG TCCATCCCGG CGACGTGCTG
GCACGCCTGA CCAACCCGCA GCTCGAACTG GACGTGACGT CGCGCGAGGC CGATATCGCC
GGCCAGCTGG GCGGCATCAG CGCCCAGCGC CTGACCCTGC AGCAGTCCCA GACCACCGAG
GACGGACAGA TTGCCGAGGC CAGCTACAAT CTTCTGAAGG CCGCCCACGA ACTGGACATC
CGCCGCCAGC TCCTGGCCCA GGGCTTCGAA TCCGACGCCA ACGTCAAGAG CTTCGCGGAC
GAGGACGAAT ATTACACCCG CCGCCTGGCC CTGCTGCGCG CCGCCCGGGA CAAGGACCGC
GCCGTCGCCC AGGCCCAGGC CCGCGACATC GACCGCACGG CCGAGCGCCT GCGCCACACC
CTGGCGGCGG TCGAGGACAG CCTGACATCG CTGATCCTGC GCGCGCCCGT GGAAGGGCGG
CTGACCAATT TCACCCTGCA ACCCGGCCAG ACGCTGAAGG CCGGCGATCC GATCGGCCAG
ATCGACAGCC AGGGCGCATG GCGCCTGGAC GCCGACATCG ACGAATTCTA CCTGGCCCGC
GTCGCGGTGG GCGAACACGG CATCGCCCAT ATCGACGACC ACGACGTGCC CTTCACCGTC
GCCCGCGTCC ATCCGCAGAT CACCAGCGGC CAGTTCCGCG CCGAACTGAC GTTCGACACC
CCCCCCTCGA AGGCGGGGAC CACCAGCGCC CTGCGCCGGG GGGAAAGCGT GGAATGCCGC
CTGACGCTGG GCCAGACCCA CCAGGCGCTG ATCGCCCCCA ACGGCGCGTG GATGGACGGC
AGCGGCGGCA ACTCGGCCTT CGTCGTCTCG GCCGACGGCC ACCACGCGAC GCGCCGCCCC
ATCACCGTGG GCGGCCGCAA CCCCGAACAG GTCGAAATCA CCTCCGGCCT GCAGGACGGC
GATCGCATCG TCACATCCGC CACCACGCGC TTTCACGATT TCACCCAGCT TCTGATCCGA
TAG
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| Protein sequence | MSHGIEQASK AGTAPGAGMD RRVAPSRARR LKPWLKYGAA ALALVAATAA WRMVPASGTL
AVGADTVTID PVRTAAFLDY LPVRATVAPL HVVLLGAVQG GQVASVAVQD GALVHPGDVL
ARLTNPQLEL DVTSREADIA GQLGGISAQR LTLQQSQTTE DGQIAEASYN LLKAAHELDI
RRQLLAQGFE SDANVKSFAD EDEYYTRRLA LLRAARDKDR AVAQAQARDI DRTAERLRHT
LAAVEDSLTS LILRAPVEGR LTNFTLQPGQ TLKAGDPIGQ IDSQGAWRLD ADIDEFYLAR
VAVGEHGIAH IDDHDVPFTV ARVHPQITSG QFRAELTFDT PPSKAGTTSA LRRGESVECR
LTLGQTHQAL IAPNGAWMDG SGGNSAFVVS ADGHHATRRP ITVGGRNPEQ VEITSGLQDG
DRIVTSATTR FHDFTQLLIR
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