Gene Gdia_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2597 
Symbol 
ID6976027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2856855 
End bp2858333 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content74% 
IMG OID643392113 
Producttype I secretion outer membrane protein, TolC family 
Protein accessionYP_002276954 
Protein GI209544725 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCG CCGGACTGGT CGCGGCCGCG GCCCTCCAGG AACCGGGCCC GGCTTCGGCC 
CAAAATACGG CCCAGGCTAC AGCCCAAGGT ACGGCCCAAG GTACGGCCAT GACCCTGCAG
CAGGCCCTGG CGCTGGCGTA CCGGGGCAAT CCCGGCCTGC TGGGCCAGCA GGCGGCGCAG
CGCGCGGCGA CCGAGGATTC GGCCCAGGCC CGCAGCGGCT GGCGCCCGAC CGTGACCGCC
AACGTCAACG CCGTCTACCA GCAGGGACCC TATACCGGCG AATACGCGCT GGGATCGTTC
CAGACCAACG ACGCCGAGAC CTACCTGGCC GTCAACCAGC CAATCTATAC CGGCGGCCAG
GTCGCCAACA AGGTCCGCGC CGCCGACGCC CGGTCCTACG CCGCCGGCCA CGCCCTGCGC
CTGACCGAGG CCCAGACCTT CCAGACCGTC GTCTCCGCCT ACATGGACGT GCTGCGCGAC
CGCGACATCC TGGCGGTGCG CCAGGCCGAC CTGGGCACCC TGACCCGCCA GGCCCGGCTG
ACCACCACGC GCTTCAACCT GGGGGGCGAC GCCACCCGGC AGGTGACGCG GACCGACGTC
GAACAGGCCG AATCCCAGCG CGACGCCGCC GAGGCCGCGC TGGCGGCCGC GCAGGCGCAA
CTGACCGCCA GCAGCGCCAC CTTCCGCGCC GCCGTCGGGG CGGACCCGGG GCCGCTGACC
CAGCCCGAGG CCCTGCCCGC CCTGCCCGCC ACCCTGCCCC AGGCGGTGGC GCTGGCCCAG
CAATCCAACC CCGCCCTGGC GCGCGACCGC GCGGCCCAGG ACGCCAGCGC GGCCGACATC
GACGTCGCCC GCGCATCGTG GAACCCCACG ATCGGCGTGC GGGCCACCCT GGGGTCGATC
GGCGCGGCCT CGCCCTTCCA CGGATCGGCC TACGACCAGG AGGTCACGGG CATGGTCACC
TTCAGCCAGC CGATCGAAAG CGGCGGCCTG TACAGCGCGC AGATCCGCCA GGCGCGCGAC
AGGTTCGAAA CCGCGCGCCA GACCGTCGAG GCCTCGCGCC GCGCCGCGAT CCAGGGCGTG
GTCACCGCCT GGCAGCAGGT CCAGTCCGGC ATGGTGGCCA TCCGCGCCGG CCGCGCGCAG
GTGGCGTCGG CCACCACGGC CCTGCGCGGC TACCAGACCG AATACGGCTA CGGCATGCGC
AGCACCATCG ACGTGCTGAT CGCCGACCAG AACCTGCGCG CGGCCGAGGT CTCGCTGGCC
GAAAGCCGCC ACGACACGAT CGTGGCCGAG GCCAGCCTGC TGGCCACCAT CGGCCGCCTG
TCGGCCGCCA CCCTGCTGCC GGGCGAACGG ACCTACGACC CGAACACCGC CCTGCGCCGC
GCCCGCGCCC CCGGCTGGGT CCCCTGGACC GGCGCGGTAG CGACGCTGGA CCGCGTCGGC
TGGCAGGATG CGTGCCCCGA CTCCGCACCT TGCCAGTAA
 
Protein sequence
MILAGLVAAA ALQEPGPASA QNTAQATAQG TAQGTAMTLQ QALALAYRGN PGLLGQQAAQ 
RAATEDSAQA RSGWRPTVTA NVNAVYQQGP YTGEYALGSF QTNDAETYLA VNQPIYTGGQ
VANKVRAADA RSYAAGHALR LTEAQTFQTV VSAYMDVLRD RDILAVRQAD LGTLTRQARL
TTTRFNLGGD ATRQVTRTDV EQAESQRDAA EAALAAAQAQ LTASSATFRA AVGADPGPLT
QPEALPALPA TLPQAVALAQ QSNPALARDR AAQDASAADI DVARASWNPT IGVRATLGSI
GAASPFHGSA YDQEVTGMVT FSQPIESGGL YSAQIRQARD RFETARQTVE ASRRAAIQGV
VTAWQQVQSG MVAIRAGRAQ VASATTALRG YQTEYGYGMR STIDVLIADQ NLRAAEVSLA
ESRHDTIVAE ASLLATIGRL SAATLLPGER TYDPNTALRR ARAPGWVPWT GAVATLDRVG
WQDACPDSAP CQ