Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2597 |
Symbol | |
ID | 6976027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 2856855 |
End bp | 2858333 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643392113 |
Product | type I secretion outer membrane protein, TolC family |
Protein accession | YP_002276954 |
Protein GI | 209544725 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCG CCGGACTGGT CGCGGCCGCG GCCCTCCAGG AACCGGGCCC GGCTTCGGCC CAAAATACGG CCCAGGCTAC AGCCCAAGGT ACGGCCCAAG GTACGGCCAT GACCCTGCAG CAGGCCCTGG CGCTGGCGTA CCGGGGCAAT CCCGGCCTGC TGGGCCAGCA GGCGGCGCAG CGCGCGGCGA CCGAGGATTC GGCCCAGGCC CGCAGCGGCT GGCGCCCGAC CGTGACCGCC AACGTCAACG CCGTCTACCA GCAGGGACCC TATACCGGCG AATACGCGCT GGGATCGTTC CAGACCAACG ACGCCGAGAC CTACCTGGCC GTCAACCAGC CAATCTATAC CGGCGGCCAG GTCGCCAACA AGGTCCGCGC CGCCGACGCC CGGTCCTACG CCGCCGGCCA CGCCCTGCGC CTGACCGAGG CCCAGACCTT CCAGACCGTC GTCTCCGCCT ACATGGACGT GCTGCGCGAC CGCGACATCC TGGCGGTGCG CCAGGCCGAC CTGGGCACCC TGACCCGCCA GGCCCGGCTG ACCACCACGC GCTTCAACCT GGGGGGCGAC GCCACCCGGC AGGTGACGCG GACCGACGTC GAACAGGCCG AATCCCAGCG CGACGCCGCC GAGGCCGCGC TGGCGGCCGC GCAGGCGCAA CTGACCGCCA GCAGCGCCAC CTTCCGCGCC GCCGTCGGGG CGGACCCGGG GCCGCTGACC CAGCCCGAGG CCCTGCCCGC CCTGCCCGCC ACCCTGCCCC AGGCGGTGGC GCTGGCCCAG CAATCCAACC CCGCCCTGGC GCGCGACCGC GCGGCCCAGG ACGCCAGCGC GGCCGACATC GACGTCGCCC GCGCATCGTG GAACCCCACG ATCGGCGTGC GGGCCACCCT GGGGTCGATC GGCGCGGCCT CGCCCTTCCA CGGATCGGCC TACGACCAGG AGGTCACGGG CATGGTCACC TTCAGCCAGC CGATCGAAAG CGGCGGCCTG TACAGCGCGC AGATCCGCCA GGCGCGCGAC AGGTTCGAAA CCGCGCGCCA GACCGTCGAG GCCTCGCGCC GCGCCGCGAT CCAGGGCGTG GTCACCGCCT GGCAGCAGGT CCAGTCCGGC ATGGTGGCCA TCCGCGCCGG CCGCGCGCAG GTGGCGTCGG CCACCACGGC CCTGCGCGGC TACCAGACCG AATACGGCTA CGGCATGCGC AGCACCATCG ACGTGCTGAT CGCCGACCAG AACCTGCGCG CGGCCGAGGT CTCGCTGGCC GAAAGCCGCC ACGACACGAT CGTGGCCGAG GCCAGCCTGC TGGCCACCAT CGGCCGCCTG TCGGCCGCCA CCCTGCTGCC GGGCGAACGG ACCTACGACC CGAACACCGC CCTGCGCCGC GCCCGCGCCC CCGGCTGGGT CCCCTGGACC GGCGCGGTAG CGACGCTGGA CCGCGTCGGC TGGCAGGATG CGTGCCCCGA CTCCGCACCT TGCCAGTAA
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Protein sequence | MILAGLVAAA ALQEPGPASA QNTAQATAQG TAQGTAMTLQ QALALAYRGN PGLLGQQAAQ RAATEDSAQA RSGWRPTVTA NVNAVYQQGP YTGEYALGSF QTNDAETYLA VNQPIYTGGQ VANKVRAADA RSYAAGHALR LTEAQTFQTV VSAYMDVLRD RDILAVRQAD LGTLTRQARL TTTRFNLGGD ATRQVTRTDV EQAESQRDAA EAALAAAQAQ LTASSATFRA AVGADPGPLT QPEALPALPA TLPQAVALAQ QSNPALARDR AAQDASAADI DVARASWNPT IGVRATLGSI GAASPFHGSA YDQEVTGMVT FSQPIESGGL YSAQIRQARD RFETARQTVE ASRRAAIQGV VTAWQQVQSG MVAIRAGRAQ VASATTALRG YQTEYGYGMR STIDVLIADQ NLRAAEVSLA ESRHDTIVAE ASLLATIGRL SAATLLPGER TYDPNTALRR ARAPGWVPWT GAVATLDRVG WQDACPDSAP CQ
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