| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2586 |
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| Symbol | |
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| ID | 6976016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2839011 |
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| End bp | 2843108 |
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| Gene Length | 4098 bp |
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| Protein Length | 1365 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643392103 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_002276944 |
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| Protein GI | 209544715 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGC CGCGTCCCCT GCTACCCGCT TCGCGCCACC TTGCCACGCT GGCGGAAGGC
GCGCGGGACA ACGGGCAGCG CAAGCGGTTG CAACGGCTGG AGCGGCTGAA CGGCTTCAAC
GCCTTCCTGG CACGCGTCGG CATGGCGTTC GATCCCGCCA TGGACGAAAC CGCCCTGCTG
CACGCGGCAT GCGAGGCCGC GACCCGGACC GCGCGCCTGC GGGCCGCCTT CGTCGCCCGG
CCGGACGCCG GGGGGGATTT CCATCCGCTG GCGTATAGCG GGCCGGTTCC GCAACTGCAC
GATCCCGCTT TCTCGGCCAG CCCCGACATG CCGGCGCGTC ACGGCCATGT CGGGCGCGCC
TGGCATGACA GGCAACCGGT CTTCTGTGCC GATATCGCGC GGGAGGACGA TCTGCGGCCC
TGGCAGGCCC GGATGCGCAA GCTGGCCGTG CGGTCCTGCG CGGCGCTGCC GCTCTGGCGC
GCCGGCAGGG TCTGGGCCGT GTTCGGCGTC TATGACGCGC AGGACGATAC GTTCGATCCC
GCGGTCAGGA CGATCCTGCT GGACGCGGTG GCCGGCCTGT CGCGCGCACT CAGGACACAG
GACGAACTGC GGTCGCGCGC GGCCCAGATC GACCGGTCGC AGGTGGGGAT CGTGCTGCTG
CGCGACACGC GCATCCACCG TGCGAACGCC TTCGCCGCCG CCCTGGTGGG CTGCACGCCG
AACGACCTGC ACAACGCCCC GGCGGACGCG ATCCTGGCCG ACAGGACCCA TGGGCCGCAA
CTGGAACGGG CACAGGCGCA ACTGCGCGAC ACCGGCCAGG CCAGGCTGTC CGGCGTGCAT
CTGGCCGGGC CGGACGGGCA GGACGTGATC GCCGACCTGT CCGCCGTGAT GCTGGACGAC
CCGCCGGGCA CGGATTCGGT CTGGACCATC GAGAACGTGA CCGCGCGCGA GGAGACGCAA
CGCCTGTATC GCGCGCTGAT CAACGCCGTG TCCGCCATGC TCGCCGCCGA GGACGAGGCC
GAAAAATGCC GCGCCGTATG CGACACGCTG GTCGACGGCA CGCTGTTCAA CGCCGTCTGG
CTGGCGCAGC CCGACCTGTC CGGCCGGATA CGCGTGCGGG CCCATGCGGG CAAGGGCGGG
GACGTCATCA CCCGGCTGAA ATGGCAAATC GATATGGACG CCGACACCCT GCCGATGACG
GTCCGGTCCT GGCGGGAGGA GGACCTGGTC TATACGAACG ATCCGGCGAC CGACCTTGCC
GCGGTCCAGG GCTACTGGCA GATCGCGGAC TACCGATGGC GCGGCGTGCT GTCGGTCCCG
GTGCTGCGGG GCGGCCAGAT CTGGGCCGTC CTGGCCTTCA CGACGCAGCG GATCGGCGGC
TTCGACGACA AGAGCATCAC GCTGTGCCGG CGGGTGGCGG ACCTGATGGG CCAGAGCCTG
GACCGGCTGG ACACCAGCCG CAACCTGGAA AAACTGCGGC ACGAGGAAGC CCGGCTCGCC
CGGCGCGACG CGCTGACCGC GCTGCCCAAC CGGCTGGCGC TGGAGGAATA CCTGCCCAAG
GCGCAGGAAC GGGCCACCGA GCGCGGCATG TCCATGGCGA TCGGGCTGAT GGACCTGGAC
GGCTTCAAGG CCGTCAACGA TACCTACGGC CACGCGGCCG GGGACAAGGT GCTGGCCGAA
CTCAGCCGGA GGCTGTGGGA GGCCCTGCGC GAGACCGGCT ATGTCGCCCG GCTGGGGGGC
GACGAGTTCG TGGTCGTCCT GGAAAACCTC GACGCGGCCA CGGCGAACGA ACAGGCCGCG
GCGGCGCTGG ACAGCCTGGC CTCGGTCGTG GCGGAGCCGT TCGTCCTGGA CGACGGGAAG
ACCGCCAGGG TGGGCCTCAC CATGGGGGTC GCGCTCTTTC CGCAGGACGG CGACAGGGCG
GAGGCATTGC TGCGCCGGGC CGACAACGCG ATGTACAGGG CCAAGCAGAA CCCGAACAAG
CGCGAGGCCA ACTGGCATTT CGCGGCCGGC CTCGACGAGG CGCTGGATCT TGAAGACGAC
GCCGCCGCGG ACCTGTTCCC GATCGCGCCT TACGGGACGA AGGCCGCGGA CCTGCTGGTC
CGGGCGGCCA GGGCCGCCGC CCGGATCGCG GACAGTGTTC GCATGGCCGC GATCCCGGCG
ATCTGGAAGA AGAGCGGCGG CGCGCCGGTA TTGGCCAATC TGACGCAGGA GCAGCACGAG
CGCCTGAACG ACCGCGAGGC GAAGCATCTG GAATTCCTGG TCGCCCCCAC GACGGGCAGG
AAGGACGTGC TGGCGGCCGC GCGCACGCTG GGCACGATGT ATACGCTGTT CGGCGTCGAT
CCGGTCGTGT TCGTCGCCGA GCAGAGCGGC TATATGCGCC TGCTTCTGGC GGAGATGGAG
GCCGGCGGCG TCAGCGGCGA CGACCGCTAC CTGGTGCAGC AGATCGTCGA GGCCCGCTAT
CGGGACGACC GCAGGATGCG GCGCCTGATC GGGACGGGCG TGCACAAGGC CTATGCCGCG
TCCCTGTCCG ACGAGGGGGC CGGCGGCGCG TGGGGCCAGG TCAGCGCCGA CGCGCTGACC
GCCCTGGCGA GGCTGCCCGG TATCCAGGCG GCCTTTCTGG GCCGCCCCAA CGCGGCCGGG
GAACTGGTCG CGCAATCCAT CGCCGGGCCG TGCGCCCCGG CACTGGACGA GGCGCTGCTG
CGCGGCGACG CGCGGCCGGT GATCGCCCGG TCGCATCATG GGGCGCACCA TGGGGCGCAC
CCCGGGTCGC ACCAGGGCAG CTTCATCGGC GCCCGGGCCT GGCGCACGGG CGAACGGCAG
ACCTGTCCGT CCATCGAACT GGATGACGCC ATGGCGCCGT GGCACACGCT GATGGCCGAT
CTGCGGATTC ATTCGGCCAT GAGCGTGCCC GTCCGGCGCC AGGACGGGAC GACGGCGCTG
GTGCTGACCC TGTTCGGCGC CTGCCCCAAC CAGTTCGAAT CCGCCGACAT GCGGAAGTTC
GCCATTGGAT TGCAGGAAAA ATGGGAAAGA CTGTGGCGGG ACGGCCAGGG CATGTCCGCC
GAGCGGTCGT CCCACCTGCG CGAACGCCTG TTCTCGGGCG GCCTGCATAT GTTCATGCAG
CCCGTCATCG ACCTGCGCAC GGGCCGGCTG CTGAAGGTCG AGGCGCTGGC CAGGCTGAAG
GACGCCGACG GCACGATCCT TCCTCCGGCG ACCTTCCTGA CGCTGCTGGG GCATGACGAA
CTGGACCGGC TGTTCCAGAT CGGGCTCGAA CAGGGTCTGG CATGGCTGCA GTCGTGGGAC
GCGAAGGGCG TGTCCACCGA ACTGTCGGTC AACATGCCGC CGTCCTGCCT GTCGAACGCC
AACGTCCTGC GCATGGTCGG CGACATGCTG GACCGCTACG ACATCGCGCC CGGCCGGCTG
ACGCTGGAAG TCCTGGAAAA CCAGGCCCTC GATTCCGACA GGCAGGGGAC GGTGCTGCGG
GATTTCCGTG CGATGGGTGT GCAGATGGCC ATCGACGATC TCGGGGCGGG CCACAGCAAC
CTGCTGCGGC TGTCCGCGAC GCCTTTCGAC TGCATCAAGG TGGATCGCGG CCTGCTGCGC
CATATCCGCG ACGTGCCCCT GCAGATCTTC AGCGTCATCC GCTCGCTGCG GGAAATGGGC
CACGACCTGC ACAGCCAGGT GGTGATGGAA GGCCTGGAAG ACGCCGACAT GATCGAGGCC
ATGCGCCATC TGGGCTGCCG CTACGGGCAG GGGTTCGGCA TCGCCCGGCC GATGCCGGCG
GATGATTTCC TGGACTGGTA CCGCACCCGT TCGGACCAGG ATCGGAAGGA AGAAGACAGC
AGGATTCACA GCGACCTTGG CGCGCTGGCC TATCTGTGGG CGGCCACGCG CGGCCATCCG
CCGCCGGGCG GGTTCCACCT GAAGGACGGG CCGTTGACGC GGTGGCTGGA AAAGCGCGGC
CGGGACGACC CCGATGCCGT GCGATGGTAC CGCATCCTGT CCGCCGGCCC CGTGACCGAG
GAAACGGCGC GCGACATGCG GGAATGGCTG GCGGACCGCG TGACCAACGC CCAGGGCGAC
AGAGGCGGCC GCGCCTGA
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| Protein sequence | MRVPRPLLPA SRHLATLAEG ARDNGQRKRL QRLERLNGFN AFLARVGMAF DPAMDETALL
HAACEAATRT ARLRAAFVAR PDAGGDFHPL AYSGPVPQLH DPAFSASPDM PARHGHVGRA
WHDRQPVFCA DIAREDDLRP WQARMRKLAV RSCAALPLWR AGRVWAVFGV YDAQDDTFDP
AVRTILLDAV AGLSRALRTQ DELRSRAAQI DRSQVGIVLL RDTRIHRANA FAAALVGCTP
NDLHNAPADA ILADRTHGPQ LERAQAQLRD TGQARLSGVH LAGPDGQDVI ADLSAVMLDD
PPGTDSVWTI ENVTAREETQ RLYRALINAV SAMLAAEDEA EKCRAVCDTL VDGTLFNAVW
LAQPDLSGRI RVRAHAGKGG DVITRLKWQI DMDADTLPMT VRSWREEDLV YTNDPATDLA
AVQGYWQIAD YRWRGVLSVP VLRGGQIWAV LAFTTQRIGG FDDKSITLCR RVADLMGQSL
DRLDTSRNLE KLRHEEARLA RRDALTALPN RLALEEYLPK AQERATERGM SMAIGLMDLD
GFKAVNDTYG HAAGDKVLAE LSRRLWEALR ETGYVARLGG DEFVVVLENL DAATANEQAA
AALDSLASVV AEPFVLDDGK TARVGLTMGV ALFPQDGDRA EALLRRADNA MYRAKQNPNK
REANWHFAAG LDEALDLEDD AAADLFPIAP YGTKAADLLV RAARAAARIA DSVRMAAIPA
IWKKSGGAPV LANLTQEQHE RLNDREAKHL EFLVAPTTGR KDVLAAARTL GTMYTLFGVD
PVVFVAEQSG YMRLLLAEME AGGVSGDDRY LVQQIVEARY RDDRRMRRLI GTGVHKAYAA
SLSDEGAGGA WGQVSADALT ALARLPGIQA AFLGRPNAAG ELVAQSIAGP CAPALDEALL
RGDARPVIAR SHHGAHHGAH PGSHQGSFIG ARAWRTGERQ TCPSIELDDA MAPWHTLMAD
LRIHSAMSVP VRRQDGTTAL VLTLFGACPN QFESADMRKF AIGLQEKWER LWRDGQGMSA
ERSSHLRERL FSGGLHMFMQ PVIDLRTGRL LKVEALARLK DADGTILPPA TFLTLLGHDE
LDRLFQIGLE QGLAWLQSWD AKGVSTELSV NMPPSCLSNA NVLRMVGDML DRYDIAPGRL
TLEVLENQAL DSDRQGTVLR DFRAMGVQMA IDDLGAGHSN LLRLSATPFD CIKVDRGLLR
HIRDVPLQIF SVIRSLREMG HDLHSQVVME GLEDADMIEA MRHLGCRYGQ GFGIARPMPA
DDFLDWYRTR SDQDRKEEDS RIHSDLGALA YLWAATRGHP PPGGFHLKDG PLTRWLEKRG
RDDPDAVRWY RILSAGPVTE ETARDMREWL ADRVTNAQGD RGGRA
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