| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2521 |
|---|
| Symbol | |
|---|
| ID | 6975951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2776473 |
|---|
| End bp | 2778185 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643392039 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_002276880 |
|---|
| Protein GI | 209544651 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.062267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGG CCGGCATGGC GGCGGCGGTG CGGCGGGCGC GCACGGCCCC CCGCGCCCTG
GTATCCGGCG TCTGCGCGCC GGGCGGGGCG CGCGACGTGG TGGCCGGCGT GACCCTGGCC
TCGATGAACA TTCCGCAGGT GCTGGGCTAT GCCGGCATTG CCGCGATGCC GGCCGTGACC
GGCCTGTATA CCGTGCTGCT GCCGCTGGTG GCGTTCGCCC TGCTGGGGTC GTCGCGGCAT
CTGGTGGTGG CGGCCGATTC CGCCACCGCC GCCATCTTTT CCAGCGGCCT GGCCGGCATG
GCGGCGGCGG GCAGCCCGAA ATACGTGGCG CTGGTCGGCA CGGTCACGTG GCTGGTGGCC
GGTTTCCTGT TCGTGGGGCG ACTGTTCCGG CTGGGATTCC TGGCGGATTT CTTTTCGCGC
ACCGTGCTGG TGGGGTTCCT GGCCGGGGTC GGGGTGCAGG TCGGCATCGC GATGTCGCGC
GACATGCTGG GCGTGGCCGC GACCGCCCAT AACCCGGTGC GGCAGTTGCT GCAGGTCGCG
GACGGGCTGC CGCACGCCCA TCCGCTGACG GTCGGGCTGT CGCTGCTGGT CGTGGCGGTC
ATCATGGGGG GGCGGCGGCT GGTGCCGCAC GCGCCGCTGG CCATGGTCGC GGTGGTGGGC
GGCATCCTGG CCAGCCGGGT GCTGGACCTA GCGGGGCGGG GGGTGGCCGT CATCGGTCCG
ATCGCGGGCG GCCTGCCGTC GCTGGGGCTG CCGGACGTAT CGTGGAACGA GATGGTGGCC
CTGCTGCCCG TCGCGACCTC GTGCGTGTTC GTCATCATCG CGCAGAGCGC CGCGACATCG
CGGGCTTTCG CCCTGCGCGC TCATGAGGAG GTGGACGAAA ACGCCGATAT CCTGGGCCTG
TGCGCCGCCA ATGCCGCCGC CGCGCTGACG GGCGCCTTCG TCGTGAACGG CAGCCCCACC
CAGACGGCCA TGGCGGTGCG GGCGGGCGCG CGCAGCCAGC GGGCGCAGGT GGCATTCGCG
CTGGTCACGC TGGTGGTGGT GCTGGTGCTG ACCGGGCCGC TGCGCGACCT GCCGCGCTGC
GTGCTGGCGT CCATCGTCTT CACCGTGGCG GTGGGGATGA TCGACTGGCG GGCCATGTGG
GCCATCCGGC GCGAAAGCCC GGGCGAATTC GGCCTGGCCA TGGTCACAGC CGCCGCCGTG
GTGGGGATCG GGGTGGAACA GGGCATCTTC CTGGCCATCG CGCTGTCGCT GTTCCGCCAT
GTCCGGCACA GCTATCGCCC GCACACCATG GTGCTGCGGC AGGACCCGGT GACCGGCGCG
CTGGAGACCG AACCCGTCGC CCCCGGCAGG CAGACGGAAC CGGGGCTGGT CGTCTATCGC
TTCGGCGCCG ACCTGTTCTA CGCCAATTGC AGCCGCTTCA CCGACGACGT GCACCTGCTG
ATCGATCATG CGCCGGCGCC GGTGCGCTGC TTGATCGTCG ATGCCAGCGC GATCACGGAC
ATCGATTTCT CCGCCGCCGG CGCGCTGCGC GACCTGCTGG CGGACTTGCG CAGGCGGGGC
ATCGTCGTGC TGTTCGGCCG GGTCAGTTCC TATCTGCGGG CCGACATGCA ACGGCACCGC
ATCCTGTCGG CCGAAGACCC GAACGCCAAC TTCGCCGCCC TGCATCCGGC GCTGGCGGCC
GGGCGGGCGA TCGTGAAGGC AGCCGGGGCC TGA
|
|---|
| Protein sequence | MIRAGMAAAV RRARTAPRAL VSGVCAPGGA RDVVAGVTLA SMNIPQVLGY AGIAAMPAVT
GLYTVLLPLV AFALLGSSRH LVVAADSATA AIFSSGLAGM AAAGSPKYVA LVGTVTWLVA
GFLFVGRLFR LGFLADFFSR TVLVGFLAGV GVQVGIAMSR DMLGVAATAH NPVRQLLQVA
DGLPHAHPLT VGLSLLVVAV IMGGRRLVPH APLAMVAVVG GILASRVLDL AGRGVAVIGP
IAGGLPSLGL PDVSWNEMVA LLPVATSCVF VIIAQSAATS RAFALRAHEE VDENADILGL
CAANAAAALT GAFVVNGSPT QTAMAVRAGA RSQRAQVAFA LVTLVVVLVL TGPLRDLPRC
VLASIVFTVA VGMIDWRAMW AIRRESPGEF GLAMVTAAAV VGIGVEQGIF LAIALSLFRH
VRHSYRPHTM VLRQDPVTGA LETEPVAPGR QTEPGLVVYR FGADLFYANC SRFTDDVHLL
IDHAPAPVRC LIVDASAITD IDFSAAGALR DLLADLRRRG IVVLFGRVSS YLRADMQRHR
ILSAEDPNAN FAALHPALAA GRAIVKAAGA
|
|---|
| |