| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2519 |
|---|
| Symbol | |
|---|
| ID | 6975949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2772234 |
|---|
| End bp | 2774582 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643392037 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002276878 |
|---|
| Protein GI | 209544649 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0131105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA TTTCCTTCAG GGTTTCCCTT CTTCTTTGCG CAGTCTCGAT CATCCCGATT
TCCGCCGTCG CCGCGACGCA GCCCAAGACC CATCCGGCAG CCCATCCGGC GGCAGCCCCG
TCCGAATCCA TATCGGTCGT CCGTACCCTG CGGCAGGCAT CGGGCTCCGG CCAGATGGTC
CGTACCCATG CCGAAGCCTC GGTCAGTACC GTGGATCGTG CCTACATCAC CAAACAGGTG
GCCAGCGCCG GCGCGCTGAA CCTGGTGCAG AACATGCCCG GTGCCAACGT CGCAACGTCC
GACGCCTTCG GCATGAGCAA TCAGGTCACC ATGACCCTGC GCGGCCTGAA CCAGCAGGAA
ATCGGCTTCA TGGTCGATGG CACGCCGCAA AACGATCCCA ATAACGGCAC CATCTACCCG
TCGCAGCTCA TCGATTCCGA AAACCTGCAA AGCGCGTCGA TCACCCAGGG CTCGTCACCC
ATCGACACCC CCAGCTATGT CGATCTCGGC GGTCAGGTCA GCTTCAAGAC CATCGACCCG
TCGCATCAGT TCGGCGGCTA CGCATCCTCC ATGTTCGGCA CGTGGGATGC CAAGAAAGAA
TTCATCCGTA TCAATACCGG CGATATCGGC CATACCGGCA TCCGGGGCTG GATGTCCTTT
TCCGATTTCT ACGACCAGCA CTTCACCGGC CCGGGCACCG ACCGCCGCCT GCACATCGAC
GCGAAATTCC TGAAGGAATG GGGGCAGGGA AACCGCGTCG CGGCCGTCTT CACCTGGGCG
CACCAGACGA TTTCCAATTA CTACGAACCC ACGCTCGCAC AGTGGAACGC CACCGGACGG
TCCAACTATT ACAGCCCCAC CTACATCCAG GGCGGATCCC CCGCCGCCAA CTCGGCCTAC
TGGCGGATGT ACCAGAACCC GTGGGAAGAT TTCAATATCG GCCTTCCCTC GACCTTCCGC
CTGGCCAGAA ACCTCACGGC GGATGTCGAG CCCTATTTCT TTCACGGCTC CGGTGGCGCT
CTCAGCGGCA CAACCCTGCC CACGGGCGGC TATTACTGGG GCAACCAGTT CGAATCCCCG
GGCTCCACCC TTCCCGGCGC CAGCGGCGGC CAGGCTCCGG CCGTCCAGCG ATACCTCAAC
TCCCCTTACC GTACCGGCTT CGTCGAAAAG CTCAACTGGA CGCAGGGAAA AAACACCCTG
ACGCTGGGAA ACTGGTACGA ATATGACGAT TTCTCCAACT GGATCGACTA CACGCCCGTC
ACGGCCAGCG GCGCGCCCCA GGGCCCGCGC GGCACCGATC CCACGGTCAT GATGGCCAAC
GGCCGCCCGC TGCGCTCGGG CGACTACAAC CTCATGACGC AGGTCAACGG CATCTTCCTC
AACGACCGGC TCAGCCTGCT GCATGATCAT CTGCAGATCA CCGGCGGCAT AAAGGCCGTC
ATGGTCGACC GCGTCGGCAC CAACCACATT CCGGGCACCG AATACCGCAT CCACGACAAC
AGTTTCCAGC CGCTGCCGCG CCTGATGGTC CGTTACGACT TCAACCACGA ACATCAGCTG
TTCTTCAACG TCACCACCGG TTTCCGCGCG CCGTTGGGCA CCAGTTTCTT CGGCAGCACC
AGTCCCGCCA CCGGGCAGGT CACATCGCTG GGCGCCGGGC AGCAGAAGGA CGAATACTCC
ATCGCCGAGG AAATCGGCTA CCGCTACCAG GGCCGCCAGG TCCTCGGCAG CGTCACCTTC
TTCAACTATA ACTTCACCAA CCGGCAGATC GCCACGCAGA CCTATGTCGG CAACCTGCCC
GTCTCCACCA CGATCAACGA GGGCGGGCAG ACCTCGCGCG GCGTCGATAT CGAACTCGGC
ACGGTTCCCT TCATGCATTT CAGCCCCTAC GCCTCGTTCG AATATCTGCA CACCACGATC
GACAACGATT TCAGGGTCGG AAACGACTAC CTGCCAACCA AGGGCAAGAC AGCCGTGCAA
AGCCCGCGCT TCCAGGCATC CTTCGGTCTG TCCTATGACG ATTCCCTGTT TTTCGGAAAT
TTTGGCCTCA AATATCTCTC ATCCCAATAC TCCACTTTCA TGAACGATGA AAAAATGGCC
GCCCAGACCC ATGGCGACAT GACGATCGGC GTCTACCTAC CGTCCTACCG TTACATCAAG
CATCCGAAAT TCCAGCTCAA TTTCGTCAAT CTATGGAATA CGCACTACCT GGCCGGCCTG
GGTTCCGTCC TGCCCAACGC GCGGTCCACA CGCGGCGTCA ACGGCACCAT CATCGACGCC
GCCGGTGCGC CGACCTATAT CATCGGCGCG GGCTTCACCG TCGCCGCCCA GCTTTCGACC
GAATTCTAG
|
|---|
| Protein sequence | MKPISFRVSL LLCAVSIIPI SAVAATQPKT HPAAHPAAAP SESISVVRTL RQASGSGQMV
RTHAEASVST VDRAYITKQV ASAGALNLVQ NMPGANVATS DAFGMSNQVT MTLRGLNQQE
IGFMVDGTPQ NDPNNGTIYP SQLIDSENLQ SASITQGSSP IDTPSYVDLG GQVSFKTIDP
SHQFGGYASS MFGTWDAKKE FIRINTGDIG HTGIRGWMSF SDFYDQHFTG PGTDRRLHID
AKFLKEWGQG NRVAAVFTWA HQTISNYYEP TLAQWNATGR SNYYSPTYIQ GGSPAANSAY
WRMYQNPWED FNIGLPSTFR LARNLTADVE PYFFHGSGGA LSGTTLPTGG YYWGNQFESP
GSTLPGASGG QAPAVQRYLN SPYRTGFVEK LNWTQGKNTL TLGNWYEYDD FSNWIDYTPV
TASGAPQGPR GTDPTVMMAN GRPLRSGDYN LMTQVNGIFL NDRLSLLHDH LQITGGIKAV
MVDRVGTNHI PGTEYRIHDN SFQPLPRLMV RYDFNHEHQL FFNVTTGFRA PLGTSFFGST
SPATGQVTSL GAGQQKDEYS IAEEIGYRYQ GRQVLGSVTF FNYNFTNRQI ATQTYVGNLP
VSTTINEGGQ TSRGVDIELG TVPFMHFSPY ASFEYLHTTI DNDFRVGNDY LPTKGKTAVQ
SPRFQASFGL SYDDSLFFGN FGLKYLSSQY STFMNDEKMA AQTHGDMTIG VYLPSYRYIK
HPKFQLNFVN LWNTHYLAGL GSVLPNARST RGVNGTIIDA AGAPTYIIGA GFTVAAQLST
EF
|
|---|
| |