| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2486 |
|---|
| Symbol | |
|---|
| ID | 6975915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2741921 |
|---|
| End bp | 2743324 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643392003 |
|---|
| Product | S-antigen family protein |
|---|
| Protein accession | YP_002276845 |
|---|
| Protein GI | 209544616 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.13457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.608286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGA CGATCGAGAA AACTGAGGAA TGCGCCGCGC ATGTCGCGGA AACGTCGCTG
GTGTTGCGTG TGTGTCGCGC GGATGGAACG AGCCGGCCGG GATTTGCATG GCCGGATCAG
GTCGGTGCTG AAATCGTCGC GCCGGACTGG AGCGCAGTCA AGGAATGCGG TCATGGACTG
CATGGCTGGC TCTACGGCCA GGGCGATCAC TCGTGTGTCG ATTACTGGCG GAACGACGAT
GCGCGCTGGT ACGTCCTGGA GGTGCGGAAT ACCGATTTGG TCATGCTCGG CGGGAAATGC
AAATTCCCGC GTGCGATCGT TCGATTCATC GGAAGTATGC GCGAGGCTGC CGCTTTCATC
CGCGCTAACG AAACGAAGGC GCAGACCGTT GCCGTTATCG GTGCGGAGAT CTCCGTTGGG
GATAGGGAGT CCTGCATCGT TGGTTCTCTC GGCACGGCCA CGGCGGGCAT TCGCGGCGCG
GCCACGGCGG GCAATCGCGG CACGGCCACG GCGGGCGATA GCGGCACGGC CACGGCGGGC
GATAGCGGCA CGGCCACGGC GGGCAATCGC GGCACGGCCA CGGCGGGCAT TCGCGGCACG
GCCACGGCGG GCAATCGCGG CGCGGCCACG GCGGGCGATG GCGGCACGGC CACGGCGGGC
AATCGCGGCA CGGCCACGGC GGGCGATAGC GGCACGGCCA CGGCGGGCTA TGGCGGCGCG
GCCACGGCGG GCGATATCGG CACGGCCACG GCGGGCGATA GCGGCACGGC CACGGCGGGC
AATCGCGGCA CGGCCACGGC GGGCAATGGC GGCGCGGCCA CGGCGGGCAT TCGCGGCACG
GCCACGGCGG GCGATAGCGG CACGGCCACG GCGGGCAATC GCGGCGCGGC CACGGCGGGC
GATAGCGGCA CGGCCACGGC GGGCTATGGC GGCACGGCCA CGGCGGGCGA TAGCGGCACG
GCCACGGCGG GCAATCGCGG CACGGCCACG GCGGGCGATA GCGGCACGGC CACGGCGGGC
ATTCGCGGCA CGGCCACGGC GGGCGATAGC GGCACGGCCA CGGCGGGCAA TCGCGGCGCG
GCCACGGCGG GCGATAGCGG CACGGCCACG GCGGGCTATG GCGGCACGGC CACGGCGGGC
GATAGCGGCA CGGCCACGGC GGGCAATCGC GGCACGGCCA CGGCGGGCGA TAGCGGCACG
GCCACGGCGG GCTATGGCGG CACGGCCACG GCGGGCGATG GCGGCACGGC CACGGCGGGC
GATCATGGCG AAATCCGCAT TCGTTATCGG GATACAAAAT CCGAACGATA TCGAACTGTT
GTCGGATATG TCGGCGAAGA CGGAATCAAG CCGAACGTGA AATACCGCCT GAACGCGGAT
CATAAGTTTT CCGAAGAACC CTGA
|
|---|
| Protein sequence | MSETIEKTEE CAAHVAETSL VLRVCRADGT SRPGFAWPDQ VGAEIVAPDW SAVKECGHGL
HGWLYGQGDH SCVDYWRNDD ARWYVLEVRN TDLVMLGGKC KFPRAIVRFI GSMREAAAFI
RANETKAQTV AVIGAEISVG DRESCIVGSL GTATAGIRGA ATAGNRGTAT AGDSGTATAG
DSGTATAGNR GTATAGIRGT ATAGNRGAAT AGDGGTATAG NRGTATAGDS GTATAGYGGA
ATAGDIGTAT AGDSGTATAG NRGTATAGNG GAATAGIRGT ATAGDSGTAT AGNRGAATAG
DSGTATAGYG GTATAGDSGT ATAGNRGTAT AGDSGTATAG IRGTATAGDS GTATAGNRGA
ATAGDSGTAT AGYGGTATAG DSGTATAGNR GTATAGDSGT ATAGYGGTAT AGDGGTATAG
DHGEIRIRYR DTKSERYRTV VGYVGEDGIK PNVKYRLNAD HKFSEEP
|
|---|
| |