| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2389 |
|---|
| Symbol | |
|---|
| ID | 6975819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2648837 |
|---|
| End bp | 2650099 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643391913 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002276755 |
|---|
| Protein GI | 209544526 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CGCATACCAC TGCAGCCTGT ACTGGCAAAA CCCTCGCTAT TCCGAGGCTC
AATCGGGCCT TGTTTGCCTT ATGCGCTCTC AATTTCTTCA TGGCGGACGT CCAAGCGGGG
ATAGGGCCCT TTCTGGGCGT TTTTCTTCAG CGTCACGGCT GGCAGACGGG ACCGATCGGA
ACCGTCATGA CCGTGGGAGG CGTTGCCGGA ATGCTCGCCA CCATTCCCGC GGGCGCGCTG
ATTGATCACA CGACGAAAAA GCGGTTGCTC GTCATTGTGG CAGCGCTCTG CACGATTTCC
GCGTCACTCC TTCTGCTAAG CTCGCAAGCG GTGCCGGTTG TGACGGTCAG TCAACTTGCA
ACCGCTCTGG CCGGAGCCGG GATTGGTCCT CTGATGGCGG CCATAACGCT CGGGATCGTG
CGCCAGAAAG GCTTCAACAC ACAAATTGGC CGTAATCAGG CCTGGAACCA CGCCGGCAAT
ATGGCCGGGG CCGGACTGTC TGGCTGGCTC GGTTGGCAGT TTGGCCTCTC AGCGATTTTC
TTTCTTGAAG TCGCCTTCGG TCTGTTCGCC ATTTCTGCGG TGCTCCTGAT CCCGGAAAAA
TCCATAGATC ATAAAGCTGC ACGCGGACTG GACGATGAAC CTGCTCACGA TGAGGGGACG
ACCGAGGGGC TACGATCCTT TCTGCGACAC AAGCCTCTTC TCATTCTGGC GAGTTGTTTG
TGTTTCTTCC ATCTCGGAAA TGCCGCGATG CTCCCGCTCT ACGGCATGGC GGTCGTCAGT
GCAGGCAAAG GTAATCCCGC CATGTTCACG GCGATGACTG TGATGGTCGC ACAGGCTGTG
ATGATCGTCG TGAGCCTGCT GGCCATACGT GTCGTCAGGA ACCGTGGGTA CTGGATCGTC
CTGCTGATAT CGTTTGCCGC CCTACCGCTG CGTGGTTTGA TCGCGGGAAG CTTCATCCAG
CATTGGGGGG TGTGGCCGGT GCAGATCCTC GATGGGATCG GTGCGGGGCT TCAGAGTGTC
GCCGTGCCGG GTCTGGTGGC CAGACTGCTG AACGGAACCG GACGCATCAA TATCGGACAG
GGTGTGGTCA TGACGGCGCA GGGCATTGGA GCAAGCCTTT CTCCGGCTCT GGGAGGATGG
CTTGCCGAAG ATCTGGGATA TCCGGTGGCG TTTTATAGTC TGGGCTGTTT TGCAATCTTG
TCACTGGGGC TCTGTATAGG CTCGGCATCG ATCCTACGCT CTGCCGATCA GGTGTCGGCA
TGA
|
|---|
| Protein sequence | MTQPHTTAAC TGKTLAIPRL NRALFALCAL NFFMADVQAG IGPFLGVFLQ RHGWQTGPIG
TVMTVGGVAG MLATIPAGAL IDHTTKKRLL VIVAALCTIS ASLLLLSSQA VPVVTVSQLA
TALAGAGIGP LMAAITLGIV RQKGFNTQIG RNQAWNHAGN MAGAGLSGWL GWQFGLSAIF
FLEVAFGLFA ISAVLLIPEK SIDHKAARGL DDEPAHDEGT TEGLRSFLRH KPLLILASCL
CFFHLGNAAM LPLYGMAVVS AGKGNPAMFT AMTVMVAQAV MIVVSLLAIR VVRNRGYWIV
LLISFAALPL RGLIAGSFIQ HWGVWPVQIL DGIGAGLQSV AVPGLVARLL NGTGRINIGQ
GVVMTAQGIG ASLSPALGGW LAEDLGYPVA FYSLGCFAIL SLGLCIGSAS ILRSADQVSA
|
|---|
| |