| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2353 |
|---|
| Symbol | |
|---|
| ID | 6975783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 2610259 |
|---|
| End bp | 2611080 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643391880 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_002276722 |
|---|
| Protein GI | 209544493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTA CACAATCGGG ACCGATCCGC CTGGTTCTCG CGGATGTCGA CGGCACGCTG
GTCACGCGGG AGAAGATCCT GACCCCGCGC GCCATCCGCG CCGTGGAACG CCTGCGCGAG
CGGGGGATCG TGTTCACCAT CACCAGCGGC CGGCCGCCGC TGGGCATGAA GATGGTGATC
GACCCGCTGC ATATCGACCA GCCGATCGCC GGCTTCAACG GCGGCATGAT CGTCCGCCCC
GACTATTCGG TGATCGAGGC CCACACCCTG ACCCAGGACG TCGCGCGCCG CACGCTGGAG
ATCCTGCGCG ACCATCGGGT CGACCCGTGG GTGTATAATG GCAACGACTG GATCGTCTCG
AACGCCGAGG CGCCCCATGT GGCGCGCGAG CAGTGGACGG TGAAATTCCC GCCCAAGGTC
GCCGATGTCG GCGCGCAGTT GGACCAGGTG GTCAAGATCA CCGGCGTCAG CGACGATCTG
GAACTGATGA AGAAGGTCGA GCACGACCTG CAGCAGGCGC TGGGCGACGC GGCCTCGGCC
GCGCGGTCGC AGCCCTATTA TGTCGACGTC ACCCACCATG ATGCCAACAA GGGCGGGGTG
GTCAAGGCGC TGGAACGGCT GCTGGGCATC CCGGCGGCGC AGATGGCGAC CCTGGGCGAC
CAGCCCAACG ACGTGCTGAT GTTCGTGCGC AGCGGCCTGT CCATTGCGAT GGGCCAGGCG
ATAGACGAGG TCAAGGCACA GGCCACCCAC GTTTCCACCT CCTCCGAGGA GGAAGGATTC
GCCATCGGGG TGGAACGCTA TATTCTCGGA GACGATGTCT GA
|
|---|
| Protein sequence | MTATQSGPIR LVLADVDGTL VTREKILTPR AIRAVERLRE RGIVFTITSG RPPLGMKMVI
DPLHIDQPIA GFNGGMIVRP DYSVIEAHTL TQDVARRTLE ILRDHRVDPW VYNGNDWIVS
NAEAPHVARE QWTVKFPPKV ADVGAQLDQV VKITGVSDDL ELMKKVEHDL QQALGDAASA
ARSQPYYVDV THHDANKGGV VKALERLLGI PAAQMATLGD QPNDVLMFVR SGLSIAMGQA
IDEVKAQATH VSTSSEEEGF AIGVERYILG DDV
|
|---|
| |