| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2298 |
|---|
| Symbol | |
|---|
| ID | 6975728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2548075 |
|---|
| End bp | 2548734 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643391826 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002276668 |
|---|
| Protein GI | 209544439 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.11047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAA AAAAAATCGA CGGTGAACGG CGTGGCCGCG GCCGGCCGCA ATCCTTCGAC
CGGGACCAGG CCCTGTGCGC GGCCATGCGC CTGTTCTGGG ACCGTGGCTA TGAAGGCACC
AGCTTCGACG ACCTGACGGC GGCGATGGGG ATCAGCCCGT CGAGCTTCTA CAACGCCTTC
GGCAGCAAGG AGCAGTTGTA CCAGGAGGCG ACCGAGGCGT ACCTGACCGC CTCGCGCGCG
TGGTTCCTGG ACATCCTGCA ACAGGACGCC GACACGCGGA CCGTTTTCCG GCACCTGATG
GAAGCGGCGG CGACCGAGTT CACGCGCGAG GACCTGCCGG CGGGGTGCAT GATCTCGGTG
TCCGGTACCC AGTGCGCGCC CGGCCAGGCC CGCCTGCGCG ACCTGATGGC CCGCCAGCGC
GCGCTGTCCG AGGCCGCGAT GGCCGACCGC CTGCGCCAGG GCGTGGCGGA TGGCGACATG
CCGGCGGATA CGGATGCCGC GGGGCTGGCG GCCTTCTTCA GTTCGCTGGC ACGCGGGATG
GCGGTGCAGG CGCGCGACGG TGCGTCGCGG GACAGGCTGC TGGACATCGC ACGGATCGGC
ATGCAGGCTT GGCCCACGCG ACAGGACACG GTCCTTGTCC CACCCGTGGC GCGTTCATAA
|
|---|
| Protein sequence | MTPKKIDGER RGRGRPQSFD RDQALCAAMR LFWDRGYEGT SFDDLTAAMG ISPSSFYNAF
GSKEQLYQEA TEAYLTASRA WFLDILQQDA DTRTVFRHLM EAAATEFTRE DLPAGCMISV
SGTQCAPGQA RLRDLMARQR ALSEAAMADR LRQGVADGDM PADTDAAGLA AFFSSLARGM
AVQARDGASR DRLLDIARIG MQAWPTRQDT VLVPPVARS
|
|---|
| |