Gene Gdia_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2220 
Symbol 
ID6975649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2462856 
End bp2463887 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID643391749 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_002276592 
Protein GI209544363 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.135715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA TGCGCGCGGC CGTCCTGGTC GCCCCCCACA GGTTCGAAGT CAGGGCCGTG 
CTGCTTCCCC CGGTCGGCCC CGACGACGTG CTGGTCAAGG TCGATCGCTG CGGTATATGC
GGCACCGACC TGCATATTTT CGCAGGCCAC TACGCGGCCG ACCGGCTGCC GCTGGTCCCC
GGTCACGAAT TCACGGGGAC GATCGCGCGG ATGGGCGAGC GCGTCACCGG CCTGGAGCCG
GGACAACGGG TCGTGGCCGA CATCAATGTG GGATGCGGCC ACTGCTTCTA CTGCCGGCGC
AACGAGGTGC TCAATTGCCG GGCGGCGTGG CAGGTCGGCA TCCATCGTGA CGGCGCCTTC
GCCGAATATG TCGCGATTCC GGCGCGGCAG ATCGTCCCGG CGCCGGCCGG CGTGGCGGCT
GAAATCCTGG CCCTGACCGA ACCCGTTTCC TGTGTCGTGC GCGCCGCGCG CAAGGCGGGC
GCGACCTTCG GGCAGTCGGT CGTGATCCTG GGGGCCGGGC CGATCGGCAA CCTGCACGTC
CAGATGATGC GGCTGGCCGG GGCCGCGCCG ATCATCGTCG TCGAACTGTC GCCCGAGCGC
GCGCGGCTGG CGGCGGAGGC CGGGGCCGAC GTGGTGGTGA CCGATCCCGA CCGGATGCAG
GACATCGTGC GCGCCCATAC CGGCGGCCGC GGCGCCGATA TCGTGATCGA AAGCGTGGGC
GTGCCGGCAC TGTATGCGCG TGCGTTCGAC CTGATCCGCC CGGGCGGCCA TGTGGCGGCG
TTCGGCCTGA CCGGGCCGGA CGCCACCGTG CCCGTGGGCA TCGTCGACAT GATCCTGAAG
GAAACGTCGA TGGCCGGATC TGTGGCCGGC ATGGGGCAGG ATGTCCATGA CGCGCTGACG
CTTCTGGTAC ATGACCGGTT CCGCGTGGCG CCCTTCATCG GCACCGTCGT GCCGCTGGCC
GATATCCAGC AGACCTTCGA CACGATCAGG GACCGGCCGG AGGTGCTCAA GATTCAGATC
GCGCCGACAT AA
 
Protein sequence
MDTMRAAVLV APHRFEVRAV LLPPVGPDDV LVKVDRCGIC GTDLHIFAGH YAADRLPLVP 
GHEFTGTIAR MGERVTGLEP GQRVVADINV GCGHCFYCRR NEVLNCRAAW QVGIHRDGAF
AEYVAIPARQ IVPAPAGVAA EILALTEPVS CVVRAARKAG ATFGQSVVIL GAGPIGNLHV
QMMRLAGAAP IIVVELSPER ARLAAEAGAD VVVTDPDRMQ DIVRAHTGGR GADIVIESVG
VPALYARAFD LIRPGGHVAA FGLTGPDATV PVGIVDMILK ETSMAGSVAG MGQDVHDALT
LLVHDRFRVA PFIGTVVPLA DIQQTFDTIR DRPEVLKIQI APT