| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2194 |
|---|
| Symbol | |
|---|
| ID | 6975622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2431484 |
|---|
| End bp | 2432842 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643391723 |
|---|
| Product | L-serine dehydratase 1 |
|---|
| Protein accession | YP_002276567 |
|---|
| Protein GI | 209544338 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCC TTTTCGACCT TTTCAGGATC GGCATCGGCC CGTCCTCGTC CCACACGGTC
GGGCCGATGC GCGCGGCCCG GCGCTTCGCC ACGCACCTGC CCCCCGCGAT GCCCGTCGCG
CGGCTGCGCG TCACGCTCTA TGGCTCGCTG GCCTGGACCG CCAGCGGTCA CGCCACCGAC
AAGGCCGTCA TCCTGGGCCT GGCGGGCGAG ACGCCCGAGG GCATTGACCC CGACGCCGCC
GGAGACATCG TCCGCCGGAT CGGCGCCGCG CGCACGGTCC TGCTGCATGG GCGCGCCGTC
GCCTTCGATC CCGCCCGCGA CATCGTGCTG GACCGCGACA CGATCCCGCC CGTCCACCCC
AACACGCTGC AGTTCCAGGC CCTGGCCGCC GACGGCACGC CGCTGGAAAC CGGGCGATTC
TGTTCGGTCG GCGGCGGCTT CATCGTGCCG GAAGACGCCA CGAAGCATGC GGGCTATGCC
CAGCCGGCCA TGCCGCTGGA CTTCGCCAGC GGCGTGGAAC TGCTGGACCG CACGCGCCAG
AGCGGCCTGG GCATCGCGGG CGTCGTCCTG GCCAACGAGA CCGCGCTGCG CCCGCCCGCC
GAAATCACGG CGTACCTGGA CCGGATCATC GACACCATGA TGACCTGCGT CGAACGCGGT
CTGGTCCAGC GCGGCACGCT GCCCGGGCGG ATCAAGGTCC CGCGCCGCGC GGCGGCGCTG
CACGAACGGC TGCTGGAGCG CACGCGCCTC AACCAGCGGC CACCGCACGA GGCGATGGAC
TGGATCAGCC TGTTCGCCAT CGCGGTGAAC GAGGAAAACG CTGCCGGCGG CCGCGTCGTG
ACCGCGCCCA CCAACGGCGC GGCCGGGGTC ATCCCCGCCG TGCTGCGCTA TTACCGCGAT
TTCTGCCCCG GGGCCTCACG CGCCGGGATG CACGATTTCC TGCTGACGGC GGCGGCGGTC
GGCGGCCTGT TCAAGCTCAA CGCCTCGATC TCGGGGGCCG AGGTCGGGTG CCAGGGCGAG
GTCGGGGTGG CGTCCTCGAT GGCGGCGGCG GGCCTGGCGG CGGCACTGGG CGCGACCCCG
CTGCAGATCG AGAACGCCGC CGAGATCGGC ATGGAACACC ATCTGGGCAT GACGTGCGAC
CCGGTCGCCG GCCTGGTTCA GATCCCGTGC ATCGAGCGCA ACGCCTTCGG CGCGGTGAAG
GCGGTCAATG CCGCCTCGCT GGCCATGCAT GGCGACGGGG CGCACCAGGT CTCGCTGGAC
CAGGTGATCC GCACCATGGC GGAAACGGGG CGGGACATGA ACCATCGCTA CAAGGAAACC
GCGCTGGGCG GCCTGGCGGT CAATTTCCCG GAATGCTGA
|
|---|
| Protein sequence | MISLFDLFRI GIGPSSSHTV GPMRAARRFA THLPPAMPVA RLRVTLYGSL AWTASGHATD
KAVILGLAGE TPEGIDPDAA GDIVRRIGAA RTVLLHGRAV AFDPARDIVL DRDTIPPVHP
NTLQFQALAA DGTPLETGRF CSVGGGFIVP EDATKHAGYA QPAMPLDFAS GVELLDRTRQ
SGLGIAGVVL ANETALRPPA EITAYLDRII DTMMTCVERG LVQRGTLPGR IKVPRRAAAL
HERLLERTRL NQRPPHEAMD WISLFAIAVN EENAAGGRVV TAPTNGAAGV IPAVLRYYRD
FCPGASRAGM HDFLLTAAAV GGLFKLNASI SGAEVGCQGE VGVASSMAAA GLAAALGATP
LQIENAAEIG MEHHLGMTCD PVAGLVQIPC IERNAFGAVK AVNAASLAMH GDGAHQVSLD
QVIRTMAETG RDMNHRYKET ALGGLAVNFP EC
|
|---|
| |