Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_2058 |
Symbol | |
ID | 6975485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 2281649 |
End bp | 2282329 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643391588 |
Product | heme exporter protein CcmB |
Protein accession | YP_002276433 |
Protein GI | 209544204 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGT CGATGCCCGC CCTGCTGGCC GCCGTCATCG GGCGCGACCT GCGGCTGGCG CTGCGTCACG GGGCCGACAC GCTGGGTGCC GTGCTGTTCT TCATCCTGGC GGGGGCGCTG TTTCCCCTGG CGCTGGGCCC GTCGCCCGAA CTGCTGCGCC GGATGGCGCC GGGCATCGTC TGGGTCTGCG CCCTGCTGGC CGCCCTGCTG CCGCTGGACC GCCTGTTCGG GTCCGAACTG GAAGACGGGT CGCTGGACCA GCTGATGCTG TCGGGCCTGC CGCCCGCCCT GGTCGCGCTG GCCAAGATGG TGGCGCACTG GCTGACCACC GGCCTGCCGC TTCTGGTCGC GGCGGGGCCG CTGGCCATCA TGCTGGGACT GCCGCTGCCG GTCCTGCCGA TCCTGCTGGG GGGGCTGGCG CTGGGCACGA TCGTGCTGTC GCTGATCGGC GGCATGGCGG CATCCGTGGT GCTGGGCGCA CGGCGCGGCG GCGTGCTGCT GCCGCTGCTG GTGCTGCCGC TGGCAACCCC CGCGCTGATC TTCGGCGCGG CGGCGCTGGA CGCGGCGCAG ACCGGCCTGT CCTGGACGCC GGACCTGGAA TTGCTGGGTG CCTTCCTGGC CGGGGCGCTG CCGCTGTGCC CGCTGGCGGC GGGGGCCGGG TTGCGCGCGG CGGTCGAGTA G
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Protein sequence | MNASMPALLA AVIGRDLRLA LRHGADTLGA VLFFILAGAL FPLALGPSPE LLRRMAPGIV WVCALLAALL PLDRLFGSEL EDGSLDQLML SGLPPALVAL AKMVAHWLTT GLPLLVAAGP LAIMLGLPLP VLPILLGGLA LGTIVLSLIG GMAASVVLGA RRGGVLLPLL VLPLATPALI FGAAALDAAQ TGLSWTPDLE LLGAFLAGAL PLCPLAAGAG LRAAVE
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