| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_2054 |
|---|
| Symbol | |
|---|
| ID | 6975481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2277761 |
|---|
| End bp | 2278216 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643391584 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_002276429 |
|---|
| Protein GI | 209544200 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGCC CCCTGATCGC CGTCCTGAAC GGACCCAACC TCAACATGCT CGGACTGCGC
CAGCCCGAAG TCTATGGTCG CGCGACCCTG GACGACGTGG AGCAGATCTG CATCCAGGCC
GCCGAGCGCC TGGATGTCGC CATCGACTTC CGCCAGACCA ACGGCGAGGG CGAACTGGTG
TCGTGGGTTC AGGAATGCCG CAACCGCGCG CGGGGGATCG TGATCAATCC GGCCGCCTAC
GGCCACACCT CCATCGCCCT GCTCGACGCG CTGCTGGCGG TCGATCTGCC GGTGGTCGAA
ATCCATATTT CCAACATTCA TCGACGTGAG GAATTCCGCC ACCATACCTA TTGCTCCCGT
GCCGCCGTGG GCGTCATCTG CGGCCTGGGA GTACGCGGCT ATGCTTTGGC GCTTCAGGCG
ATGACAGACA TGATTCTGGA CGAGGACGAT CGATGA
|
|---|
| Protein sequence | MVRPLIAVLN GPNLNMLGLR QPEVYGRATL DDVEQICIQA AERLDVAIDF RQTNGEGELV
SWVQECRNRA RGIVINPAAY GHTSIALLDA LLAVDLPVVE IHISNIHRRE EFRHHTYCSR
AAVGVICGLG VRGYALALQA MTDMILDEDD R
|
|---|
| |