Gene Gdia_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_2019 
Symbol 
ID6975445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2241043 
End bp2242293 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID643391548 
Productmajor facilitator superfamily transporter 
Protein accessionYP_002276394 
Protein GI209544165 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTG AAAAAGAACG GAGTTCCCCC CTCGCCATGA CGTCCTCGCG GCCCGGCCCG 
GCCCACCCTG CGGCCAATCC CACGCTGCGG ATCCTGGCCG TCGTCCTGTT CAACCTGATC
TGCTACGTCG ATATCGGCCT GCCGCTGGCG GTCATACCGG TCTTCGTCCA TGGCACGCTG
GGGTACAACA CTGTCGTCGC CGGGCTGGCG GTGTCGCTGC AATATCTGGC CACCTTCGCC
TCGCGCGCGC AGGCCGGCCG GTTCGTCGAC GGGCGGGGGG CCAAGCCGGC GGTGATGATC
GGGCTGGCCA CCTGCGTCGC GGCCGGGGTG GCGCTGATGC TGGCGGGCCT GCTGTCCGGC
CACGCGGTAC CGTCGGTCCT GCTGCTGATC ACCAGCCGTA TCCTGATGGG TGTGGGCGAA
AGCTGGACCG CGACGGGCGC CATCCTGTGG AATATCGGCC GGGTCGGCGC CGAACGCACG
GCGCAGGTGA TTTCGTGGAA CGGCATCACC TCGTATGGCG GCATCGCCTT CGGCGCGCCG
GTGGGGGCGC TGCTGTCGCA GCTTGCCCCG CCGATGGGCG GGCTGGCAGG GGTCGGGCTG
CTGTCGGCGG TGCTGCCGGC GGCGGGGCTG GTCCTGGCCA CGCGGTACGC CCCGGTGCCG
CCGATGACCA AGGGCGAGAC CATGCCGTTC AGCCAGGTGT TCTGGCGGGT CCTGCCCTAC
GGCATCGTGC TGGCGTGCGG TTCGGTGGGG TTCGGGGCGA TCTCGGCCTG CCTGTCGCTG
TATTTCGCCG ACCGGCACTG GGACGGGGCG GCGCTGGCGC TGATGATGTT CGGCGTGGTC
TTCGTGATGG TGCGGCTGCT CTTCTCGCGC CAGATCGGCC TGCGCGGCGG CCGGACCGTA
GCCATCGTCT CGCTGCTGGT CGAGGTCGCG GGCCTGCTGA TCCTGTGGCG CAGCAGCGGG
GTGCCCGCGG CCGACCTGGG CGCCGCGCTG ACCGGCGCCG GCTTCTCGCT GGTCTTCCCC
GCACTGGGGG TCGAGGCCGT GACGCGGGCC GGCCCGCAGA ATCGCGGCGC CGCGCTGGGG
GCGTTCAGCG TCTTCCTCGA TATCGGCATC GGCATATCGG GCCCGATGCT GGGGCTGGTG
ATCAACAGCC TGGGCTATGG GCCGATGTTT CTGGCCTCGG CCCTGTTTAC CGGGGCGGGG
GTCGGTGCCA CTGTCCTGCT GCGGGGGGGC GCGCGCCGAG GCACCCCCTG A
 
Protein sequence
MMPEKERSSP LAMTSSRPGP AHPAANPTLR ILAVVLFNLI CYVDIGLPLA VIPVFVHGTL 
GYNTVVAGLA VSLQYLATFA SRAQAGRFVD GRGAKPAVMI GLATCVAAGV ALMLAGLLSG
HAVPSVLLLI TSRILMGVGE SWTATGAILW NIGRVGAERT AQVISWNGIT SYGGIAFGAP
VGALLSQLAP PMGGLAGVGL LSAVLPAAGL VLATRYAPVP PMTKGETMPF SQVFWRVLPY
GIVLACGSVG FGAISACLSL YFADRHWDGA ALALMMFGVV FVMVRLLFSR QIGLRGGRTV
AIVSLLVEVA GLLILWRSSG VPAADLGAAL TGAGFSLVFP ALGVEAVTRA GPQNRGAALG
AFSVFLDIGI GISGPMLGLV INSLGYGPMF LASALFTGAG VGATVLLRGG ARRGTP