| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1981 |
|---|
| Symbol | |
|---|
| ID | 6975407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2199049 |
|---|
| End bp | 2199972 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643391510 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
|---|
| Protein accession | YP_002276356 |
|---|
| Protein GI | 209544127 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
|---|
| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACC TCATCGTTCT CGGCGCCGCG GCGGGCGGCG GTTTCCCACA ATGGAATTCC
AACGCCCCGG CATGCCGGCG CGCCCGGGCG GACGATCCGG CGGCGCCGTC CCGCACCCAG
GCTTCGATCG CCGTCAGCGG GGACGGCGCG CACTGGTTCG TCGTCAACGC CTCGCCCGAC
CTGCGGGCGC AGATCGGCCA GACCCCGGCG CTGCATCCAA GGCACGGCCT GCGCTCGACC
CCCATTGCCG GCGTGATCCT GACCGGAGGC GAGGTCGATA CCGTCACCGG GCTGCTGACC
CTGCGCGAAC GCCAGCCCTT CACCCTGCTG GCGACGCCGC CGGTGCTGGA CCTGCTGGAC
GCCAATCCGA TTTTCGAGGC GCTGGACCGC AGCATCGTCC CGCGCGTGCC CCTGGCGCTG
GACCAGCCCT TCGCCCTGGC GCTGCCCGAC GGCACGCCCG CCGGGCTGAC GATCACCCCC
TTCGCGGTTC CGGGCAAGGT GCCGCTCTAT GCCGAGAGCG GGCCCGATCC CGCCGCCATC
GTCGAGAACG GCGAGACGAT CGGGCTGGCG ATGACCGACG GCGTGCGCCA CGCCTATTTC
ATTCCCGGCT GCGCGCGCAT GACCGGCCCC CTGCGGGCGC GCCTGCGCGG CGCGGACCTG
GTCTTCTTCG ACGGCACGCT GTGGACCGAT GACGAGATGC TGCGCGCCGG CGTGGGACAG
AAGACCGGAC AGCGCATGGG CCATATGTCG GTCAGCGGTG ACGGCGGGAC CATCGATGCG
TTCGCGGACC TCGACGTCCG GCGCAAGGTG CTGATCCATA TCAACAATTC CAATCCCCTC
CTGCTGGCCG ACAGCCCGGA GCGCCAGGTC GCGCACCAGG CGGGGTGGGA GGTTTCATTC
GACGGCATGA GGATCACGAC ATGA
|
|---|
| Protein sequence | MIDLIVLGAA AGGGFPQWNS NAPACRRARA DDPAAPSRTQ ASIAVSGDGA HWFVVNASPD
LRAQIGQTPA LHPRHGLRST PIAGVILTGG EVDTVTGLLT LRERQPFTLL ATPPVLDLLD
ANPIFEALDR SIVPRVPLAL DQPFALALPD GTPAGLTITP FAVPGKVPLY AESGPDPAAI
VENGETIGLA MTDGVRHAYF IPGCARMTGP LRARLRGADL VFFDGTLWTD DEMLRAGVGQ
KTGQRMGHMS VSGDGGTIDA FADLDVRRKV LIHINNSNPL LLADSPERQV AHQAGWEVSF
DGMRITT
|
|---|
| |