| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1965 |
|---|
| Symbol | trpA |
|---|
| ID | 6975391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2179759 |
|---|
| End bp | 2180583 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643391494 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_002276340 |
|---|
| Protein GI | 209544111 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCA TCGCCCGCCG TTTCGCGGCC CTGAAGGCGC AGGACCGTGG CGCCCTGATT
CCCTACCTGC AGGCCTGCGA TCCGGATTAC GAGACCTCGC TGGCGCTGCT GCGTGCCATG
CCCGGGGCCG GGGCCGACCT GATCGAGATC GGCGTGCCCT TCAGCGACCC CAGCGCCGAC
GGCCCCACCA TCCAGGCCGC CGCCCGGCGC GGGCTGGCGG CCGGCGCCAC CATGGCGCGC
GTGCTGGAGA TGGTCACCCG CTTCCGCGAG GGCGATGCCG ACACGCCGAT CGTGCTGATG
GGCTACCTGA ACCCGATCGA GGCCTATGGG CCCGCGCGCT TCTGCGCCGA TGCCGCCCGG
GCTGGGGTGG ACGGGCTGAT CGTCGTCGAC CTGCCGCCCG AGGAGGCCGA CCTGCTGGAA
GGCCCGGCGG CGGACCACGG GCTGGACATC ATCCGGCTGG TGGCGCCCAC CACCGACGAT
ACGCGCCTGC CGCTGGTCTG CCGCCATGCC TCGGGCTTCA TCTACTACGT CAGCATCACC
GGGGTGACTG GCACGCGCAC CGCCAGCGCC GACGAACTGG CCCAGGCGCT GCCGCGCCTG
CGGGCCGCGA CCGACCTGCC GGTGGCCATC GGCTTCGGCA TCCGCACGCC CGAACAGGCG
GCGGCCGCCG TACGCGTCGC CGACGCGGCC GTGGTGGCGT CGGCGCTGAT CGCCACGCTG
GAGGACTCGC TGGACGCCGA GGGCCGCGCC GGACCGGACA CGCTGAAGCG CGTGCTCGCG
CAGCTCGAAG CCCTGGGGCG GGCGGTACGA AACGCCCGCA CCTGA
|
|---|
| Protein sequence | MSRIARRFAA LKAQDRGALI PYLQACDPDY ETSLALLRAM PGAGADLIEI GVPFSDPSAD
GPTIQAAARR GLAAGATMAR VLEMVTRFRE GDADTPIVLM GYLNPIEAYG PARFCADAAR
AGVDGLIVVD LPPEEADLLE GPAADHGLDI IRLVAPTTDD TRLPLVCRHA SGFIYYVSIT
GVTGTRTASA DELAQALPRL RAATDLPVAI GFGIRTPEQA AAAVRVADAA VVASALIATL
EDSLDAEGRA GPDTLKRVLA QLEALGRAVR NART
|
|---|
| |