| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1940 |
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| Symbol | trmE |
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| ID | 6975366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2152916 |
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| End bp | 2154223 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643391469 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002276315 |
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| Protein GI | 209544086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.704243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG AACAGATGCC GATCTTCGCG CTGGCGACCG GGGCGGGACG CGCGGCCATC
GCCGTCATGC GCCTGACCGG GGCGGGATGC GGCGACATGC TGCAACGGCT GTGCGGCCCG
CTGCCGCCGC CGCGCCAGGC ATCCCTGCGT GGCCTGTGGC GGCGTGACGC GGCGGCGGCG
CCGGTGCTGC TGGACCGGGC GCTGGTGCTG TGGTTCCCCG GTCCGCGCAG CTATACCGGC
GAGGACAGCG CGGAGCTGCA CCTGCATGCC GGCCCGGCGG TGATCGCGGG CGTGGCCGAC
GCGCTGGTGG CACTGGGCGC ACGGCCGGCG GAGCCGGGCG AATTCACCCG CCGTGCCTTC
GCCCATGGCC GACTGGACCT GATCGAGGCC GAGGGCATCG CCGACCTGAT CGATGCCGAG
ACCGAAGCGC AGCGGCGGCA GGCCCTGGAC CAGGCGGACG GGACGCTGAG CCGGATCTAT
GACGGCTGGG CGGCCCGGCT GCGGACCCTG CTGGCACATC AGGAGGCACT GATCGACTTC
CCGGACGAGG ACCTGCCGCC CGGTGTGGAA CAGGCGCTGC TGGATGACCT GACGGCGCTG
CGGTCCGAGA TGCAGGCCCA CCTGGACGAT GGCGGCCGGG GCGAGAAGCT GCGCAGGGGG
CTGGTCTTCA CCATTGTCGG GGCGCCCAAT GTCGGCAAGT CCAGCCTGCT GAACGCGCTG
GCCGGGCGGG ACGCGGCCAT TGTTTCGGCC ATTGCGGGGA CCACGCGCGA TGCCATCGAA
ATCCGCGTGG TGCTGGGCGA TGTGCCCGTG ACCCTGATCG ACACCGCCGG CCTGCGCGAG
ACACAGGACG AAATCGAGGC CGAGGGCGTA AGGCGGGCCC TGTTTCACGT GAAACATGCC
GACTGCGTGA TCGCGATGTT CGACGGCGAG ACGGTGCCCG ACGATATTCC GGCGGATGCG
ATCAGGGTGC GGAACAAGGT CGACCTGGCA CCGGTGCCCG CCGGGGCGGA TGCGATCGGG
ATCAGCGTCC GGCAGGGCAC GGGCATGGAC GCGCTGCGCA CGGCGCTGGC CGAACGCGCC
CGGGCGCTGA CCGCGTCAGC GGCCGGCCCG CCGCTGACGC GGGCCCGCCA TCGGGCGGCG
ATCGAAGAAA CCGCTGGCCA TCTGGCCGCC GCGTTGGATA TGCACTGGCC AGAGATGCGG
GGCGAGGAAA TGCGCCTGGC CATGCGCGCC CTGGGGCGCC TGACCGGGGC GGTAGGGGTG
GAGGATCTGC TCGATACGGT GTTCGGGCAG TTCTGTATCG GGAAGTGA
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| Protein sequence | MPTEQMPIFA LATGAGRAAI AVMRLTGAGC GDMLQRLCGP LPPPRQASLR GLWRRDAAAA
PVLLDRALVL WFPGPRSYTG EDSAELHLHA GPAVIAGVAD ALVALGARPA EPGEFTRRAF
AHGRLDLIEA EGIADLIDAE TEAQRRQALD QADGTLSRIY DGWAARLRTL LAHQEALIDF
PDEDLPPGVE QALLDDLTAL RSEMQAHLDD GGRGEKLRRG LVFTIVGAPN VGKSSLLNAL
AGRDAAIVSA IAGTTRDAIE IRVVLGDVPV TLIDTAGLRE TQDEIEAEGV RRALFHVKHA
DCVIAMFDGE TVPDDIPADA IRVRNKVDLA PVPAGADAIG ISVRQGTGMD ALRTALAERA
RALTASAAGP PLTRARHRAA IEETAGHLAA ALDMHWPEMR GEEMRLAMRA LGRLTGAVGV
EDLLDTVFGQ FCIGK
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