| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1882 |
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| Symbol | |
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| ID | 6975305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2098787 |
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| End bp | 2100808 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643391408 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002276257 |
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| Protein GI | 209544028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.16309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0131619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC TGACGGATTC CTCGCAATTC TCCGGTGTCA TGCCGGGCAC TTTCGCCGTG
GTCCCGATCA TGTCTGATCG GTTCGTCTGT CTTCTCGACC CATCGGGCCG TGTCGCGGCC
TGGGGCGCGG ACGCCCGCAA CCTGACGGGC TATACGGCCG ACGACATGCT GGGCCGTCCT
CTGGCCGCGC TGTTTTCGCC GTGCCGGGGC GCCGGGGAAA CAGGGGCCGC CCTTCCGGTC
CAGGGACAGG CCGAGCGGGT CGAACTGATC GCCCGCAGGG ACGGCACCCG GTTCCACGCC
CGCATCGAAT GTCATGCCCT GGACCATTCC CGCCATATCG GCGCGATCCT GGCGGACATG
CCGGCGGCCG TCGTCGTGGT GCAGGATGTG TCGGCGGCGG GTGGGCCGGC GCAGGGTGCC
GATCCGGCGC TGCGTCCGGT CCTGGACCGG ATTCCCGACG GCATCGCCCT GTTCGGGGCG
GATTGCGGCC TGCTCTATCG CAATGACCTG TTCGGGAGCA CGCTTGCCCT GCCGGATGAC
CTGCTGTGGC CCGGTACCCA GGCCCGGGCG ATCATGGCGG TGCTGTCCGG CGATACCGCG
CGGACGGCGG ACGGTGCGTG CGACTGGACG ACCGAAATCC TGCGGCAGGG GCGGTCGCTG
CGCCTGTCCT GGACCGGGCT GCCGGATGGG CGCCGGCTGC TGCTGTGCCG GGACCTGACG
GACCTGCGCC GGTCGGAAAG CCGCGCGCGC TTTCTGGAAC AGCATGACGA TGTCACGGGT
CTTGCCAACC TCCCGGGATT GCAGACGCAT CTCCAGATGT TGTGCGAACG GCCGTCGGAA
CGCTTTACGG TCCTGTATTT CGACCTGTTC GGCTTCAAGC GCATCAACAA CACCATGGGC
CACGCGGCAG GGGACGAATT GCTGCGCCTC GTCGCCGACC GGGTGCGCCG GTTGATGGAG
CCGGACGACG TCGCCGCCCA CATCCGGGGC AATAAATTCG CGCTGGTCAT GCGGGCGGAA
CAGGATAGCG ACATGATCTG GGCGCACGCG CAGCATCTGC GCAGCGTCCT GTCGCGCCCG
ATGTCGGTCC TGGGCCACGA CGTCACGGTC GGGGTCGGGA TCGGCGTGGT GCGCTTTCCC
GCCGACGGCA GCGATCGCGA TACCCTGATG TGGAACGCCG ATATCGCGCT TCAGTATGCC
AAGGACGGCA AGGGCGAGGG AATCCGGTTC TACAATCCGG TCATGGACCG CATGCGCCAG
AAACGCATGG ACCTGGAACG CGACCTGCAG CGTGCGCTGG CGCAGGATGA ATTCGTCCTG
TTCTACCAGC CTTTTCTGAA TATCGGGACC CATCGCATCG TGGGTGTCGA GGCGCTGATC
CGCTGGATGC ATCCCGTCCG TGGCCTGATC CCGCCGGGCG ACTTCATCCC GGTGGCCGAG
GGCATGGGCC TGATGTACGA TATCGGCGTC TGGACGCTGA ACACCGCATG CCGTCAGGCG
TCTGCCTGGC CGGAGGATAT CGTCGTTTCG GTCAATGTGT CGGCGGCGCA GTTCCGGCAT
GACGGACTGG TCGAAACCGT GGCCCAGGCG CTTCTGGGGT CGGGGCTGGA TGCCGGGCGC
CTGGAACTGG AAATTACCGA AACCGCGATG ATCGACGACG TGCCGCGCGC GGCACGGGTG
CTGCGGCAGT TGCGCGAGAT GGGCGTGAAG ATCGCGCTGG ACGATTTCGG AACGGGGTAT
TCCTCGCTCA GTTTCCTGCA GAGCCTGCCC TTTACCCGGA TCAAGATCGA TCGCAGCTTC
GTCCGCGAAC TGGGCCAGGG TGTCGGCGAC GGGGCGGCGA TCGTGGGGGC GATTACCAGC
CTGTGCGGCA GCCTGAACGT GGTCGCCACC GCCGAGGGCG TGGAAACGCA GGAACAGTTC
GATTACCTCA AGCAGATCAA TTGTTCCGAA ATCCAGGGCT TTTTCATCTG CCGGCCCCGT
CCGGCCTCCG AAATCCAGCC GCTGCTGGAT CAGATCAACT GA
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| Protein sequence | MALLTDSSQF SGVMPGTFAV VPIMSDRFVC LLDPSGRVAA WGADARNLTG YTADDMLGRP
LAALFSPCRG AGETGAALPV QGQAERVELI ARRDGTRFHA RIECHALDHS RHIGAILADM
PAAVVVVQDV SAAGGPAQGA DPALRPVLDR IPDGIALFGA DCGLLYRNDL FGSTLALPDD
LLWPGTQARA IMAVLSGDTA RTADGACDWT TEILRQGRSL RLSWTGLPDG RRLLLCRDLT
DLRRSESRAR FLEQHDDVTG LANLPGLQTH LQMLCERPSE RFTVLYFDLF GFKRINNTMG
HAAGDELLRL VADRVRRLME PDDVAAHIRG NKFALVMRAE QDSDMIWAHA QHLRSVLSRP
MSVLGHDVTV GVGIGVVRFP ADGSDRDTLM WNADIALQYA KDGKGEGIRF YNPVMDRMRQ
KRMDLERDLQ RALAQDEFVL FYQPFLNIGT HRIVGVEALI RWMHPVRGLI PPGDFIPVAE
GMGLMYDIGV WTLNTACRQA SAWPEDIVVS VNVSAAQFRH DGLVETVAQA LLGSGLDAGR
LELEITETAM IDDVPRAARV LRQLREMGVK IALDDFGTGY SSLSFLQSLP FTRIKIDRSF
VRELGQGVGD GAAIVGAITS LCGSLNVVAT AEGVETQEQF DYLKQINCSE IQGFFICRPR
PASEIQPLLD QIN
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