Gene Gdia_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1881 
Symbol 
ID6975304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2097882 
End bp2098799 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID643391407 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002276256 
Protein GI209544027 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.831794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0117859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC TGGCCGACCT GACGATCTTT CGCACCCTGC ACGATACCGA CGCGACGCTG 
CGCGCGTCGG CCCATGTCGG CGAAGGGCTG GCCGTTGCCA TATGGGACCG CGACGAGGTC
GCCCTGACGC GGTACGACAC CCCCAACCAT CATACGTTGA GCCTGTACCT GGAACACGGC
GAAGGATTCC GGAAAAGGCT TGATCAAGGC TGGAAATGCA GCAATGGCGC GGGAGATTTG
TGCCTGATGC CCGCACGTGC CACCAGCGAC TGGGACGTCA GCGGGCCGAT CCGGATGTTC
CATCTCTATA TCGCGCCGCA CGCTTTCGAC CGTGCGACAT CCGAAATGTT CGACCTGGAC
CCCGCCCGCA TAAGCCTGCG CGAGGATGCC TATTTCCGCC ATGCCGGGAT CGAGGCGAAA
ATCCGTTCGG CCATTCTGCC GCGACACTGG GCCCAGCCGG CGGACCGTGT CGCGGTGACA
CAGGCGGGAA TGGACCTGCT GTCCTATCTT CTGGCACACA TGACCGACCG GCGGCTGGAC
CTGCCACGAC GGGGCGGGCT ATCGGTCGCG GCCTTCCGCC GGGTCCGCGC CCTGATCGAC
GCCGAGATGG ACCGGGCCCT GTCCATCGAC GATCTGGCCA TGGCCGCGGG GCTGAGCAGC
TTTCATTTCG CACGGGCCTT CCGCCAGTCG CATGGCGAGA CCCCGCACCA GTTCCTGACG
CGCCTGCGCA TCGAACGCGC CCGGCATCTG CTACGCCTGG GCGAATCCCC GAAGCGGATC
GCAGGCCTGT GCGGCTTCAG CAGCCATAGC CACCTGACGG CACGCTTCCG GGCGCTGACC
GGCCTGACGC CCAGCGACTA TGCCCGCCAT TGCGGCCACC GGACGGATCC GGGACCCGGC
GACGATCAGT TGATCTGA
 
Protein sequence
MTQLADLTIF RTLHDTDATL RASAHVGEGL AVAIWDRDEV ALTRYDTPNH HTLSLYLEHG 
EGFRKRLDQG WKCSNGAGDL CLMPARATSD WDVSGPIRMF HLYIAPHAFD RATSEMFDLD
PARISLREDA YFRHAGIEAK IRSAILPRHW AQPADRVAVT QAGMDLLSYL LAHMTDRRLD
LPRRGGLSVA AFRRVRALID AEMDRALSID DLAMAAGLSS FHFARAFRQS HGETPHQFLT
RLRIERARHL LRLGESPKRI AGLCGFSSHS HLTARFRALT GLTPSDYARH CGHRTDPGPG
DDQLI