Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1873 |
Symbol | |
ID | 6975295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 2087150 |
End bp | 2088013 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643391398 |
Product | glycoside hydrolase family 16 |
Protein accession | YP_002276248 |
Protein GI | 209544019 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.222637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGGT TCCGTCCATC TCATGTTCTC GTGATCGCCT GTCTGGTCTG CCTGGTCATG GCCGGGGGGG CGGCCCGGGC CGCTTCGGCC GGCGGTCTGC GGCTTTGCGG CGAGATGCCG GTCTTTCATG ACGAGTTCGA TGACCTCCGG CTCTCGGCCT GGCAGTTGGG GGGGGCGCGC TGGATCACCC ATACCCCGTG GGGAGGGGAT TTCGGGGATG CGCGGTTTAC CGATCCCGGC CCGGGCTCCG CCTTTTCCGT CCATGACGGT ATCCTGTCGA TCGCGGCGCG CAAGGATGCC GCCGGGCGCT GGACGGCCGG CCTGCTGGCG TCGGCGGACG GGGCCGGCAA CGGCTTCACG GCGATGTACG GATATTTCGA AACCCGCATG AAACTGCCGC CCGGCCCCGG TACATGGGTC GGGACATGGC TGAACGAATC GGCTCCGAAG GACTGGATGC TGCCGACCGT CGAAATCGAC ACGATCGAAT ATTATGGCCA GTTCACCGAC GGGTTTCACA CCACGGTCCA TGTCTGGCAC GGGCGGTCGT CACAGCCGGA CGGGGGTGCC GGGACGATCA TCAAGGTGCC GGCCCATTCC CTGGTCGATG ATTTCCATAC CTACGGCACG CTGGTCACAC CGCGATGGAT CACCTTCTAC CTCGATCGCA AGGAAATCTG GCGCAGTCCG ACCCCGCCGG AACACCGGTC GCCGTTCATG TTCCTGATCA ACCTGGCGCT CGGTTCGGGC TGGCCGATCG ACAAGACCCT GAATCCGGCC ATCATGAAGG TGGATTACGC CCGCGTCTAT CCGGCCGCCG ATCCCGCCGC GTTCGCCCGT TGCCTGGTGG GACAGGCGCA TTAG
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Protein sequence | MTGFRPSHVL VIACLVCLVM AGGAARAASA GGLRLCGEMP VFHDEFDDLR LSAWQLGGAR WITHTPWGGD FGDARFTDPG PGSAFSVHDG ILSIAARKDA AGRWTAGLLA SADGAGNGFT AMYGYFETRM KLPPGPGTWV GTWLNESAPK DWMLPTVEID TIEYYGQFTD GFHTTVHVWH GRSSQPDGGA GTIIKVPAHS LVDDFHTYGT LVTPRWITFY LDRKEIWRSP TPPEHRSPFM FLINLALGSG WPIDKTLNPA IMKVDYARVY PAADPAAFAR CLVGQAH
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