Gene Gdia_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1873 
Symbol 
ID6975295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp2087150 
End bp2088013 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID643391398 
Productglycoside hydrolase family 16 
Protein accessionYP_002276248 
Protein GI209544019 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.222637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGT TCCGTCCATC TCATGTTCTC GTGATCGCCT GTCTGGTCTG CCTGGTCATG 
GCCGGGGGGG CGGCCCGGGC CGCTTCGGCC GGCGGTCTGC GGCTTTGCGG CGAGATGCCG
GTCTTTCATG ACGAGTTCGA TGACCTCCGG CTCTCGGCCT GGCAGTTGGG GGGGGCGCGC
TGGATCACCC ATACCCCGTG GGGAGGGGAT TTCGGGGATG CGCGGTTTAC CGATCCCGGC
CCGGGCTCCG CCTTTTCCGT CCATGACGGT ATCCTGTCGA TCGCGGCGCG CAAGGATGCC
GCCGGGCGCT GGACGGCCGG CCTGCTGGCG TCGGCGGACG GGGCCGGCAA CGGCTTCACG
GCGATGTACG GATATTTCGA AACCCGCATG AAACTGCCGC CCGGCCCCGG TACATGGGTC
GGGACATGGC TGAACGAATC GGCTCCGAAG GACTGGATGC TGCCGACCGT CGAAATCGAC
ACGATCGAAT ATTATGGCCA GTTCACCGAC GGGTTTCACA CCACGGTCCA TGTCTGGCAC
GGGCGGTCGT CACAGCCGGA CGGGGGTGCC GGGACGATCA TCAAGGTGCC GGCCCATTCC
CTGGTCGATG ATTTCCATAC CTACGGCACG CTGGTCACAC CGCGATGGAT CACCTTCTAC
CTCGATCGCA AGGAAATCTG GCGCAGTCCG ACCCCGCCGG AACACCGGTC GCCGTTCATG
TTCCTGATCA ACCTGGCGCT CGGTTCGGGC TGGCCGATCG ACAAGACCCT GAATCCGGCC
ATCATGAAGG TGGATTACGC CCGCGTCTAT CCGGCCGCCG ATCCCGCCGC GTTCGCCCGT
TGCCTGGTGG GACAGGCGCA TTAG
 
Protein sequence
MTGFRPSHVL VIACLVCLVM AGGAARAASA GGLRLCGEMP VFHDEFDDLR LSAWQLGGAR 
WITHTPWGGD FGDARFTDPG PGSAFSVHDG ILSIAARKDA AGRWTAGLLA SADGAGNGFT
AMYGYFETRM KLPPGPGTWV GTWLNESAPK DWMLPTVEID TIEYYGQFTD GFHTTVHVWH
GRSSQPDGGA GTIIKVPAHS LVDDFHTYGT LVTPRWITFY LDRKEIWRSP TPPEHRSPFM
FLINLALGSG WPIDKTLNPA IMKVDYARVY PAADPAAFAR CLVGQAH