| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1862 |
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| Symbol | |
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| ID | 6975284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 2074364 |
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| End bp | 2076958 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643391387 |
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| Product | hopanoid biosynthesis associated RND transporter like protein HpnN |
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| Protein accession | YP_002276237 |
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| Protein GI | 209544008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR03480] hopanoid biosynthesis associated RND transporter like protein HpnN |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCCC TTCCGATCGG TCGCCTCGTG GCGTTCTGTT CCCGTCGCGC CGTGCTCGTA
TTGCTGCTGT TCGCGGCGCT GGTCGGGGGT GCGGTCGACT GCAGCATGCA CCGGCTGGGG
GTCACGACGG ATACCGGCAC CATGTTCTCG CGCACCCTGC CGTGGAAGCA GCGCTCGGAC
GAACTGGCGC GCCTGCTGCC GCAGCAGCAG GACCTGCTGG TGGCGGTGGT CGAGGCCGAC
CTGCCCGAGG AAGCGCAGGC GACGGCCCGC GCGCTGGCCG ACCGGCTGCG GGGCGACAGC
GCGCATTTCC TGTCGGTCAC CCTTCCGCAG GATAATCCCT ATCTGGTCCG CAACGGGCTG
ATGTTCCTGG ATCAGAAGAA CCTGGGCGGG GTGCTGGACA CCGTCGTGAC GGCGCAGCCC
TTCCTGGGCG GCCTGGCGGC CGACCCGTCG GGGCGCGGCC TGTTCGATTC CCTGTCGCTG
ATCGCGCTGG GCGTGTCGCA GGGCCAGGCG AACCTGAAAG GCTTCCAGCC CGCGCTGGAT
GCTTTCGCCA CCACGCTGGA ACAGGCGGCC GACGGCCACG CCCAGCCCCT GTCGTGGGAG
CGGATGCTGG CCGGCAGTCT GGCGGACATG GGCGGGAAGT TCGTCTTCGT CGTGACCCGG
CCGCGCATGG ATTATGGCTC GTTCCAGCCC GGCGGCGCGG CCAGCGACGC GATGCGCCAG
GCCATCGGCC AACTGGAATT CGTCCGGTCG GGCCACGCCA AGGTGCATCT GACCGGCGAC
GTCCAGATCA GTGACGAGGA ATTCGCCACC GTCGCCCAGG GCATGGTCGC GGGGCTGATC
GGGTCGCTGG TGCTGGTCAC GCTGTGGCTG TTCCTGGCCG TGCGGACCTG GCGGATCATC
GCGCCCATCG TCATCACCCT GGTGGCGGGC CTGTTGCTGA CGACGGGCTT CGCGGCGCTG
GCGGTCGGCA CGCTGAACCT GATTTCCGTG GCCTTCGCCG TGCTGTTCGT GGGTATCGCG
GTCGATTTCG CGATCCAGTT CTCGGTCCGC TTCCGCGCCC AGCGCCTGCC CTCCGGCGCC
ATGCCCACGG TCCAGGCGGC GCTGGAGCAT ACCGGCGAGG AAACGGGGCA CCAGATCCTG
GTGGCCGCCA TGGCGACGAT GGCGGGATTC CTGGCCTTCA CGCCCACCGC CTTCGTCGGC
GTGGCGCAGC TTGGCCTGAT CGCCGGGTTC GGCATGATGA TCGCCTTCAT CTGCACCGTC
ACGCTGCTGC CGGCGCTGCT GCGGCTGTTC CGCCCGTCGC TGGACCATCC GGCGACCGGC
TTCGCCTTCG CCCGCCCCGC GGATCGCGCG GTGCGGCTGC ATCGCACCCC GATCCTGAGC
GTCTTCACCT TCCTGGCGGT GCTGGGCGCG GTGCTGATTC CGGTGCTGAC CTTCGATGCC
GATCCGCTGC ATACCAAGGA CCCGAATTCG GACGGCATGC GGACGCTGAA GCTGCTGATG
ACCGATCCGC AGACCTCGCC CTACGGGGCG CAGGTGCTGG TCCCGAACCT GCAGCAGGCC
CATGCCCTGG CGGACCGGCT GTCGCAACTG CCGCTGGTCG ATGACGCGAT GTGGCTGGGC
TCGCTGGTCC CGGCCGATCA GCCGCCCAAG CTGGCGATGA TCCAGGACGC GGCCTCAATC
CTGCTGCCCA CCCTGGTCGT GCCCAATCCG CGTCCCGCGC CGGACGCCGA TGCCCTGCGT
GCCTCGGCGG CCAAGGCCGC CCGGGACCTG GGCGGCGTGC TGGACAAGCT GGCCCCCGGC
GATCCGCTGC GCCGCATCCA GGCTGCACTG GCGCGGCTGT CGCACGCGCC GGACGCACAG
GTGATGGCGG CGAACAGCGC GCTGGTGCGC TTCCTGCCCG GGCAGCTCGA CCAGTTGCGG
CAGATGCTTT CGGCGCAGGC CGTGACCCTG GACGACGTCC CGCAATCCAT CCGACAGGAT
TACCTGCTGC CCGACGGGCG CGCGGTGGTG GCGATCCATC CCAAGGCCTC GATGGACAGC
AGCACCGAAC TGCACCGCTA TGTCGCGCAG ATCCGCAGCG TGGCGCCCGA CGCGGGCGGC
GATGCGATCG ACGTGGTCGA AAGTGCGTCC ACCATGGTCC GGGCCTTCGT CTTCGCGGCG
ATGTCCGCCA TCGTCATGAT CGCGGTGATC CTGCTGGTGG CGCTGCGCCG CCTGCTGGAC
ATGGCGCTGG TGCTGGCGCC GCTGCTGCTG TCGGCGCTGA TGACGGTCAT CCTGATCGTC
GTGGTGCCGG AACAGCTCAA TTTCGCGAAC ATCATCGCGC TGCCGCTGCT GCTGGGCGTC
GGTGTGTCCT TCAACATCTA TTTCGTCATG AACTGGCGGT CCGGCGTCCA GGCCCCGCTG
TCCAGCCCCA CGGCGCGGGC CGTCCTGTTC TCGGCCCTGA CGACCGGGAC CGCATTCGGC
TCGCTGGCGG CATCGCACCA TCCGGGCACG GCCAGCATGG GGCGGCTGCT GCTGCTGTCG
CTGGCCTGCA CCCTGCTGGC GACGCTGATC TTCGTGCCGG CGCTGCTGCC CAAGCGTGCG
ATCGACGAGC GGTAG
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| Protein sequence | MLSLPIGRLV AFCSRRAVLV LLLFAALVGG AVDCSMHRLG VTTDTGTMFS RTLPWKQRSD
ELARLLPQQQ DLLVAVVEAD LPEEAQATAR ALADRLRGDS AHFLSVTLPQ DNPYLVRNGL
MFLDQKNLGG VLDTVVTAQP FLGGLAADPS GRGLFDSLSL IALGVSQGQA NLKGFQPALD
AFATTLEQAA DGHAQPLSWE RMLAGSLADM GGKFVFVVTR PRMDYGSFQP GGAASDAMRQ
AIGQLEFVRS GHAKVHLTGD VQISDEEFAT VAQGMVAGLI GSLVLVTLWL FLAVRTWRII
APIVITLVAG LLLTTGFAAL AVGTLNLISV AFAVLFVGIA VDFAIQFSVR FRAQRLPSGA
MPTVQAALEH TGEETGHQIL VAAMATMAGF LAFTPTAFVG VAQLGLIAGF GMMIAFICTV
TLLPALLRLF RPSLDHPATG FAFARPADRA VRLHRTPILS VFTFLAVLGA VLIPVLTFDA
DPLHTKDPNS DGMRTLKLLM TDPQTSPYGA QVLVPNLQQA HALADRLSQL PLVDDAMWLG
SLVPADQPPK LAMIQDAASI LLPTLVVPNP RPAPDADALR ASAAKAARDL GGVLDKLAPG
DPLRRIQAAL ARLSHAPDAQ VMAANSALVR FLPGQLDQLR QMLSAQAVTL DDVPQSIRQD
YLLPDGRAVV AIHPKASMDS STELHRYVAQ IRSVAPDAGG DAIDVVESAS TMVRAFVFAA
MSAIVMIAVI LLVALRRLLD MALVLAPLLL SALMTVILIV VVPEQLNFAN IIALPLLLGV
GVSFNIYFVM NWRSGVQAPL SSPTARAVLF SALTTGTAFG SLAASHHPGT ASMGRLLLLS
LACTLLATLI FVPALLPKRA IDER
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