| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1833 |
|---|
| Symbol | |
|---|
| ID | 6975255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 2036264 |
|---|
| End bp | 2037898 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643391358 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_002276208 |
|---|
| Protein GI | 209543979 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.381517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC CCGCCCGACA TACCCTGCGG GGCACGGCAC TGCTGAACGA CCCGGCCTTC
AACCGGGGAA CCGCCTTTAC GGCCGCGGAA CGGCAGACCT ACGGGCTGGA AGGCCTGCTG
CCGCCGCAGA TCGAAACGCT GGAACGGCAG GCCGAGCGGG CTCTGCGTCA CCTGGACGCC
AAGCCGACGG ATCTGGAACG CTATATCTAC CTCGCGGCCC TGGTCGACCG GAACGAGACC
CTGTTCTACA AGGTGCTGAT GTCCGACCCG GCGCGCTTCG TGCCGATCGT CTACGCCCCC
ACGCTGGGCG AGGCCTGCAA GGCATTCAGC CACATCTATC GCCGCCCCCG GGGCATGTAT
ATCAGCCTGG AGATGAAGGG CCGCATCGCG GACATCCTGC GCAACTGGCC GGTGTCCGAC
GTGCGCTTCA TCTGCGTCAC CACCGGCGGG CGCATCCTGG GCCTGGGCGA TATCGGCGCC
AACGGCATGG GCATTCCCAT CGGCAAGCTG CAGCTCTACA CCGCCTGTGG CGCCGTGCCG
CCGCAGGTCA CGCTGCCGAT CCAGCTGGAT ATCGGCACCA CCAACGCGGC GCTGCGGGCC
GATCCGCTCT ATCTGGGCCT GCGGCACGAA CCCCCGCCGC AGGCCGAACT CGACGCCTTC
GTCGAGGAAT TCGTGACGGC GGTGCAGGAG GTCTTTCCCG CCTGCTGCAT CCATTTCGAG
GACTGGAAGG GCACGGACGC GATCCGCTAC CTGGAGCGCT ACCGGGAGCG GGTGCTGTGC
TACAACGACG ACATCCAGGG CACGGCGTCG GTGACGCTGG CCGGGCTGGT CACGGCGCTG
CGGATCAAGG GCGAAAAACT GTCCGACCAG ACGGTGCTGT TCCTGGGTGC CGGGTCGTCC
GCGCTGGGCA CGTCGGACCT TCTGGTCAAG GCGATGCAGG CCGAAGGCCT GTCGCAGGCC
GACGCCCGCG CCCGCATCAC CATGATGGAC GTCAAGGGGC TGGTCGAACC CTCGCGCACC
GACCTGTCCG AGGAACAGCG GCGTTACGCC CATGCGGCGG AGCCCACGCG CGACCTGATG
GCCACCATCC GCCGCGTGCG GCCCAGCGTG CTGATCGGCG TGTCCACCGT GGGCGGCGCC
TTCACGCAGC CGGTCGTCGA ACTGATGGCC GCGATCAATG CGCGGCCGAT CATCTTTCCG
CTGTCGATCC CGCATTCGGA ATGCTCGGCC GAACAGGCCT ATGCCTGGTC CGACGGCCGG
GCGCTGTACG CGGCCGGGGT CCAGTTCCCG CAGGTCATGC GCGACGACCA TGTCTTCCGC
CCCGGGCAGG CCAATAATTT CTACATCTTC CCCGGGCTGG GGCTGGCGGT CTATGCGACG
CGTCCGCGCC TGATCCCCGA CGCGCTGATC ATCGAGGCCG CACACGCCCT GGCCGACCAG
GTCGACGTGA CGGCGCAGGC GCGCGGCATG CTGTATCCGC CGCAGAACCA GATTCTCGAG
GTCCAGGTCA CGTCGGCCTG CCGCCTTGCG GAATATCTCT TCGATGCCGG GCTGGCCACC
GTGCCGCGTC CGGACGATAT CCGGTCTTGG ATCGAGGGCA TGACCTACAG CCCGACCTAC
GCGCCGGACG CCTGA
|
|---|
| Protein sequence | MNRPARHTLR GTALLNDPAF NRGTAFTAAE RQTYGLEGLL PPQIETLERQ AERALRHLDA
KPTDLERYIY LAALVDRNET LFYKVLMSDP ARFVPIVYAP TLGEACKAFS HIYRRPRGMY
ISLEMKGRIA DILRNWPVSD VRFICVTTGG RILGLGDIGA NGMGIPIGKL QLYTACGAVP
PQVTLPIQLD IGTTNAALRA DPLYLGLRHE PPPQAELDAF VEEFVTAVQE VFPACCIHFE
DWKGTDAIRY LERYRERVLC YNDDIQGTAS VTLAGLVTAL RIKGEKLSDQ TVLFLGAGSS
ALGTSDLLVK AMQAEGLSQA DARARITMMD VKGLVEPSRT DLSEEQRRYA HAAEPTRDLM
ATIRRVRPSV LIGVSTVGGA FTQPVVELMA AINARPIIFP LSIPHSECSA EQAYAWSDGR
ALYAAGVQFP QVMRDDHVFR PGQANNFYIF PGLGLAVYAT RPRLIPDALI IEAAHALADQ
VDVTAQARGM LYPPQNQILE VQVTSACRLA EYLFDAGLAT VPRPDDIRSW IEGMTYSPTY
APDA
|
|---|
| |