| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1821 |
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| Symbol | |
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| ID | 6975243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2019990 |
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| End bp | 2021450 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643391346 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_002276196 |
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| Protein GI | 209543967 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCA TTACGTTACC TCTTTCGCCT CGCTGCCGCG CGTATGTCCT TGCCGTCCTG
ACCGCCATCG CTTTCTGGGG GACCGGCCTG CCATCCGCGC TCGCCCAGTC GGAGACATCC
AAGAGCGCCT TTACCCCTAC CGATGAAGCG GTGAGTTTTC CCCTGGGCGG CGCGGGACAG
ATCCCGATCG GTCCACTGGT CACGTCGCTC TATGGCAACC CGCATCTGTT GGGGGACTGG
GGCGGCATAC AGCCCTGGCT GATGAAGCGC GGCATCTTCG TCAATGTCGG GGTGAACGAG
GAATTCATGG GCAACATAAC CGGCGGCCGG ACGCGCGACC ACGTCCTGGC CGGACAGGTC
GCGGGCGAAG TGGATATCGA CTGGCGGAAG CTGGCAGGCA TCCCCGATTT CTGGACCCAC
ATGCTGGTCG TCAACGGGCA TGGCAACAAT TTCAGCCACA CGCTGGGTGA TTACGTCGCC
AATCCGGAAC AGATCTATGG CGCGCGCGGC AACGTGGTCG CGCACCTTGT CTCCCTCTAC
GCCGACAAAT CGTTCCTTCA TGACAGGATC ATTCTCTCGT TCGGGTGGAT GCCGACCGGC
AGCTTCTTCA ATTTCGACTA TCTGGCCTGT TCGTTCATGA ATGTTGCGAT CTGCGGAAAT
TTCGCACCGG GCAAATATGT GCCCGGCGGG CGCGACTGGC CGTCGGGCAA CCTGGGCGGC
ATCGTGCGTT TCCGGCCGAC GGAGCGGACC TATATCATGG CCGGCGCCTT CGGCGTGACG
CAGGCCGGCT ATAACGGCGG CATATCGGGC TGGTCCTGGG GACAGAAAAT GAGCGGGGTA
TCCACGCAGG TGGAACTCGG CTGGGCTCCC TCGTTCGGTC AGGACGATCT GCTGGGCCAT
TACAAGATCG GCGCCTATTA CGACAATTCC CGGTATCCGA ACCTGTATGA GGACATCAAC
GGAAATTCGT TCCAGGCCAC CGGACTGCCG CGGCGGTACG AATCCGGCCA ATGGTCGTCA
TGGCTGATGT TCGACCAGAT GCTGGTGCGC AACGGCAAGG GGGTGGCCAA CGGCCTGATC
GCGATCGGCG GCCTCGGCTA CGCGCAGGGC AATATCGTCG CCATGCGCGA CCATGAATGG
ATCGGCCTGC TGGAAAGCGG CACGCCCTGG AACCGCCCGA TGGACCAGGC CGGCATCATG
TTCCAGAACA TCGACATGAG CCACACGCTG CGCCTGCAAC AGCAATCCTC CGCCGCCCTC
GGCGTGCCCT TCCTCTCGAA TCAATGGGGC ACGGTCTACG GCGTGCAGAA CTGGGAACGG
GTCTACGAAG CCTTCTACAG CGTCCACCTG CTACGCGCGA CCGCGCTCCA GTTCGACTTC
CAGTACCTCC AGCACCCCGG CGCCACCACC ACCTTCGGCG GCGCGGCAGT CGTGGGCGGC
CAGTTCACGA CCAACTTCTG A
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| Protein sequence | MPVITLPLSP RCRAYVLAVL TAIAFWGTGL PSALAQSETS KSAFTPTDEA VSFPLGGAGQ
IPIGPLVTSL YGNPHLLGDW GGIQPWLMKR GIFVNVGVNE EFMGNITGGR TRDHVLAGQV
AGEVDIDWRK LAGIPDFWTH MLVVNGHGNN FSHTLGDYVA NPEQIYGARG NVVAHLVSLY
ADKSFLHDRI ILSFGWMPTG SFFNFDYLAC SFMNVAICGN FAPGKYVPGG RDWPSGNLGG
IVRFRPTERT YIMAGAFGVT QAGYNGGISG WSWGQKMSGV STQVELGWAP SFGQDDLLGH
YKIGAYYDNS RYPNLYEDIN GNSFQATGLP RRYESGQWSS WLMFDQMLVR NGKGVANGLI
AIGGLGYAQG NIVAMRDHEW IGLLESGTPW NRPMDQAGIM FQNIDMSHTL RLQQQSSAAL
GVPFLSNQWG TVYGVQNWER VYEAFYSVHL LRATALQFDF QYLQHPGATT TFGGAAVVGG
QFTTNF
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