| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1811 |
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| Symbol | |
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| ID | 6975233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 2003640 |
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| End bp | 2005163 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643391336 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002276186 |
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| Protein GI | 209543957 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA AGACGAGACG CACATTCCAC CGGGCCGGGC TGATGCTGCT GGCCGCCACG
ATGCTGGCGG GGTGCACGGT GGGGCCGCGC TACCAGCCGG ACCGGATGAA GCTGCCGCCG
GGCTTTGCCG AGGACGAGCA TGCCGCGACG CCGGCGGAAA TCGCCCGCAC CAATGCCGAG
CTGAAGGACT GGTGGCACCG CTTCGGCGAC GCCGAGCTGG ACCGGCTGGT CGACCGGGCG
ATCGCGGGCA ATTACGACCT GCAGATCGCC GGCCAGCGCA TCCTGGCCGA GCGCGCGCTG
CGCGACGTCC AGGCCTCCGC CTGGTATCCG CAGGTCGATG CCAACACCAC CGACGGTGAC
AGCCGCTATT CCATCAACGT GGACAACTGG CCGCTGCGCC CGGGCGATCC GGCCAACCGG
CCGGGGGCGT CGTACCTGTC CTACGGCGTC AGCGCCAGCT GGCAGATCGA CGTGTTCGGC
CGCATCCGCC GCGCGGTCGA GGCCTCGGAA CACGCGGTCG AGGAGAATGT CGAGGAACGG
CGCGCGGTGC TGATGACCAT GCTGTCGTCG CTGGTCAGCG ACTACATGGT GCTGCGCGAC
ACCCAGCTGC GGCTGGAGAT CTCGAACCGC AACATCGGGG TGGCGCAGGA AGCCTACGAC
CTGACGCGGC GGCTGTATCT GGAGGGCGTG GGCAACACGC TGCAGATCGC CCAGGCGAAG
GCCGAGCTGG ACGCCCAGCA GGCGGCGCGC GAGCCGCTGC GCACCCATAT CGCGCAGATC
ACCCACGCCA TCGACGTGCT GATGGGCCAG GTGCCCGGCA CCACCGAGGC CGAACTGAAG
GTGGCGCGGC CGCTGCCCCA GGTGCCGGAA TTCCCGGCGA CGGTGCCCTC GATCGTGCTG
GGCAACCGGC CCGACATCCG CCGCGCCGAG CGCGCCTATG CCGAGGCGAC GGCGCGGATC
GGGGTGGCGG TGGCGCAGAT GTATCCGAAT TTCGCCATTC CGCTGAACTT CAACCCCAAC
GCGTCGGCGA TGTACCAGGT GTTCGAGGCC GGGGCGCTGA GCTGGCAGTT CTTCATGCTG
GCGTCGCTGC CGCTGATGCA TGGCGGCAAG CTGACCGGGC AGATCCGCAC CGCCCAGGCG
GCGGCGGAAG CCAGCCGCCT GACCTACCGC CAGACGGTGC TGGGCGCGTT CCGCGAGGTC
GAGGACGCGA TGGCGGCGTG GCATGACGAC GTGGAGCACA CCGAACTGCT GCACCGCGCC
GCCGAGGACA GCCGGCTGGC CAGCGACCGG GCGCGCAAGC TGTATGCCGC CGGGCTGGTG
GGCTTCCTGG AGGTGCTGAC CACCGAGCGC ACCGCCCTGG CCGCCGAGAA CGCCGAGGCC
GTGGCGCGGC TGGAACGCCT GCAGGATGCC ATCGACCTCT ATACCGCCAT GGGTGCCGGC
TGGCAGGGCG TGGGGGTGAC CGCCTCCGCC CTGCCGGTGT CGCTGGAGAA GCAGAACGTC
CTGGCGCGGG CGTTCCAGGA TTGA
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| Protein sequence | MSMKTRRTFH RAGLMLLAAT MLAGCTVGPR YQPDRMKLPP GFAEDEHAAT PAEIARTNAE
LKDWWHRFGD AELDRLVDRA IAGNYDLQIA GQRILAERAL RDVQASAWYP QVDANTTDGD
SRYSINVDNW PLRPGDPANR PGASYLSYGV SASWQIDVFG RIRRAVEASE HAVEENVEER
RAVLMTMLSS LVSDYMVLRD TQLRLEISNR NIGVAQEAYD LTRRLYLEGV GNTLQIAQAK
AELDAQQAAR EPLRTHIAQI THAIDVLMGQ VPGTTEAELK VARPLPQVPE FPATVPSIVL
GNRPDIRRAE RAYAEATARI GVAVAQMYPN FAIPLNFNPN ASAMYQVFEA GALSWQFFML
ASLPLMHGGK LTGQIRTAQA AAEASRLTYR QTVLGAFREV EDAMAAWHDD VEHTELLHRA
AEDSRLASDR ARKLYAAGLV GFLEVLTTER TALAAENAEA VARLERLQDA IDLYTAMGAG
WQGVGVTASA LPVSLEKQNV LARAFQD
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