| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1762 |
|---|
| Symbol | |
|---|
| ID | 6975183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | - |
|---|
| Start bp | 1949024 |
|---|
| End bp | 1951627 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643391290 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_002276141 |
|---|
| Protein GI | 209543912 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCG AAAAATTCAC CGAACGGTCG CGCGGCTTTC TTCAGGCCGC CCAGACGATC
GCGGTGCGTG ACTATCATCA GCAACTGACG CCGGAACATC TGCTGAAGGC GCTGCTGGAC
GACCCGGAAG GGGCGGCGTC CTCGCTGATC CGTGCCGCCG GTGGGCAGGC ACCGGCGGTC
CAGGCGGCGG TCGAGGCCGC GCTGGCCAAG GTGCCGCGCG TACAGGGTGG CGGGGCCGGG
CAGCCGCAGG CCACGCCCGA CCTCGTCCGC CTGTTGGATG CCGCGCAGAC CGCGGCGCAG
AAGGCCGGTG ACGAATATGT GGCGCAGGAC CGGCTGCTGG TCGCCATCGC CGCGTCGGAC
ACGCCGGCCG GCCGCGCCCT GCGCGACGGC GGTGCCACGG CGCAGGCGCT GGACAAGGCG
GTGGCCGCCA TCCGCAAGGG CCGCACCGTG ACCAGCGAGA ACGCCGAGGC CAGCTTCGAC
GCGCTGAAGA AATACGCCCG CGACGTAACG GAAATCGCCC AGCAGGGCAA GCTGGACCCG
GTCATCGGCC GCGACGAGGA AATCCGTCGC GCGATCCAGG TCCTGGCCCG GCGCAGCAAG
AACAACCCGG TGCTGATCGG CGAGCCCGGC GTGGGCAAGA CCGCGATCGT CGAAGGGCTG
GCCCTGCGCA TCGTCAACGG CGACGTACCC GAGGCGCTGA AGAACAAGAA GCTGCTGTCG
CTTGATCTCG GGGCGCTGGT GGCCGGCGCG AAGTTCCGCG GCGAGTTCGA GGAACGGCTG
AAAGCCGTGC TGAAGGAGAT CGAAAGCGCC GAGGGGCAGG TCATCCTGTT CATCGACGAG
ATGCACACCC TCGTCGGCGC CGGCCGCACG GACGGCGCGA TGGATGCCTC CAACCTGATC
AAGCCGGAAC TGGCGCGCGG CACCCTGCAC TGCATCGGCG CCACGACGTT GGACGAATAC
CGCAAATATA TCGAAAAGGA CGCGGCCCTC GCCCGGCGCT TCCAGCCGGT CTATGTCGGC
GAGCCCTCGG TGCCCGACAC GATTTCGATC CTGCGCGGCA TCAAGGAGAA GTACGAGCTC
CATCACGGCG TGCGCATCAC CGACAACGCG CTGGTGGCGG CGGCGACGCT GTCCAACCGC
TACATCACCG ACCGCTTCCT GCCGGACAAG GCGATCGACC TGGTGGACGA AGCTGCCAGC
CGCCTGCGCA TGCAGATCGA CAGCAAGCCC GAGGAACTGG ACGAACTCGA CCGCCGCCTG
ATCCAGCTCA AGATCGAGCG CGAGGCGATT CGCAAGGAAG ACGACTCCGC CAGTCGGGAA
CGGCTGGTGA AGCTGGAAGC CGAACTGGCG GACATCGAGG AAAAATCGAA CGCCATGTCT
GCGGCGTGGC ACGCCGAGAA GGACCGGGTG AACGCAGTCC AGAAGCTGAA GGAACAGCTC
GACCAGGCGC GCTCGGACGT CGAGGTGGCG CAGCGGCGCG GCGATCTGGG GCGGGCGTCG
GAACTGATGT ACGGCGTCAT CCCGAACCTG CAGGAGAAGA TCGCCCAGGC GCAGGAGGAA
AACGAAAGCG CGGCCCAGGG GGCCGGCTTG GTCAGCGAGG CCGTGACCGA ACAGGGCATC
GCCTCCGTCG TGTCACGCTG GACCGGCGTG CCGGTGGACC GGATGCTGGA GGGCGAGCGG
GCGAAGCTGC TGCGGATGGA GGACGAACTG CGCCGCAGCG TGGTGGGCCA GGAACCGGCG
CTGAAGGCCG TGGCGAACGC CGTGCGGCGT GCGCGCGCCG GCCTGCAGGA CCCCAACCGG
CCGATCGGCT CGTTCCTGTT CCTCGGCCCG ACCGGCGTGG GCAAGACCGA GCTGTGCAAG
GCGCTGGCCC GCTTCCTGTT CGATGACGAA AAGGCGCTGC TCCGCGTGGA CATGAGCGAG
TTCATGGAAA AGCACGCGGT CTCCCGCCTG ATCGGCGCCC CCCCGGGCTA TGTCGGGTAT
GAGGAGGGCG GCGTCCTGAC CGAGGCCGCG CGCCGCCGGC CCTATCAGGT GATCCTGTTC
GACGAGGTGG AGAAAGCGCA CGAGGATGTC TTCAACGTCC TGCTGCAGGT GCTTGATGAC
GGCCGCCTGA CGGACGGGCA GGGGCGGACG GTCGATTTCC GCAACACCAT CATCGTCCTG
ACCAGCAACC TGGGGTCCGA TGTCCTGGCC CATCTGCCGG ACAACGAATC GACGGAAATG
GTCCAGGCCG AGGTCATGAA GGTGGTGCGG GCGCATTTCC GGCCGGAATT CCTCAACCGG
CTGGATGAAA TCATCCTGTT CTCGCGCCTG CAGCGCGCGG ACATGACCCG CATCGTCGAT
ATCCAGATCG CGCGCCTGCG CAAGCTGCTG GAAGACCGGC ATATCGATCT GGCCCTGGAT
GAACCGGCCC ATCTGTGGCT GGCCGAGGAA GGCTACGACC CGGTCTACGG CGCGCGGCCG
CTGAAGCGGG TGATCCAGCG CACGCTGCAG AACCCGATGG CCGGACTGCT GCTGGATGGC
ACCATCCATG ATGGCGAGAC GGTAAAGGTC TCGGCGGATG ATGTCGGCCT GACCATCAAT
GGCCGCTCGA TCGCGGAGGT CTGA
|
|---|
| Protein sequence | MNIEKFTERS RGFLQAAQTI AVRDYHQQLT PEHLLKALLD DPEGAASSLI RAAGGQAPAV
QAAVEAALAK VPRVQGGGAG QPQATPDLVR LLDAAQTAAQ KAGDEYVAQD RLLVAIAASD
TPAGRALRDG GATAQALDKA VAAIRKGRTV TSENAEASFD ALKKYARDVT EIAQQGKLDP
VIGRDEEIRR AIQVLARRSK NNPVLIGEPG VGKTAIVEGL ALRIVNGDVP EALKNKKLLS
LDLGALVAGA KFRGEFEERL KAVLKEIESA EGQVILFIDE MHTLVGAGRT DGAMDASNLI
KPELARGTLH CIGATTLDEY RKYIEKDAAL ARRFQPVYVG EPSVPDTISI LRGIKEKYEL
HHGVRITDNA LVAAATLSNR YITDRFLPDK AIDLVDEAAS RLRMQIDSKP EELDELDRRL
IQLKIEREAI RKEDDSASRE RLVKLEAELA DIEEKSNAMS AAWHAEKDRV NAVQKLKEQL
DQARSDVEVA QRRGDLGRAS ELMYGVIPNL QEKIAQAQEE NESAAQGAGL VSEAVTEQGI
ASVVSRWTGV PVDRMLEGER AKLLRMEDEL RRSVVGQEPA LKAVANAVRR ARAGLQDPNR
PIGSFLFLGP TGVGKTELCK ALARFLFDDE KALLRVDMSE FMEKHAVSRL IGAPPGYVGY
EEGGVLTEAA RRRPYQVILF DEVEKAHEDV FNVLLQVLDD GRLTDGQGRT VDFRNTIIVL
TSNLGSDVLA HLPDNESTEM VQAEVMKVVR AHFRPEFLNR LDEIILFSRL QRADMTRIVD
IQIARLRKLL EDRHIDLALD EPAHLWLAEE GYDPVYGARP LKRVIQRTLQ NPMAGLLLDG
TIHDGETVKV SADDVGLTIN GRSIAEV
|
|---|
| |