Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_1702 |
Symbol | |
ID | 6975117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 1883443 |
End bp | 1885008 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643391229 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002276086 |
Protein GI | 209543857 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAC GCCTTAACCG CCAGATGCTC GCTCTGACGA GCATGCTCCT GCTTAGCGCC TGCACGGTCG GTCCGGACTA TCACAAGCCC GATCTCGCCA GCGTGCCGCA CTGGCATCGC GGCCTGCCGG ATGCCGAAAG CCATCCCGAG GAAAGCCCCG CCGATCCGCA ATGGTGGACG ATCTATCGCG ATCCGGTGCT GACCGCGCTG GAACAGCAGG TCGCGTCCGC CAATCTGGAT CTGCGCGCGA GCGCCTATCG TCTGGCGGAG AGCCTGGCCG AGCGGCGGAT TGCGAGCGCG GCACAGTTCC CACATGTGGA GGGGAATGCC TCCTATGCAC GCGAGCGGGC CAGCACCAAC GGTATCCTCG GCCTGCTTGG CACGCTGGAG CGCGCCGGCG CGGGCGATGT CGCCAGCGGC GCGCAGGGCT TCGGCCCTGT GGCCGTGCCG GGCACGGTCG GCAATCCGTC CTTCAACCTG CCGCAATACG GCATGAGCGC GTCATGGGAG GTCGATCTCT GGGGTCATGT CCGGCGCCAG GTCGAGGCCG CCAACGCGGC GGTCAAGGCG ACGCAGGACA TGCAGCGGGA TGTCCTGGTC TCGCTGATGG CCGAGACCGC GCAGGATTAT CTCGATCTGC GTGGCGTGCA GGCGCAGATC GCCATCGTCG GCCGCAATAT CGACACTGCC CGGCACAGCG TTGTCCTGAC GGGCCTGCGC TTTGCGCAAG GTGCCTCCAC CCAACTGGAC GTAGCGGACT CGCGCGGACA GCTCAGCGAA TTCCAGTCGC GCCTGCCGAT CCTGCAGAGC CAGGAAGTGC ATCTGATCAA CGCGCTGAGC TTTCTGGTGG CACGCGAGCC GGGTGCGCTC CGGGCGCAGC TCGCCACGCC GGCCCCGATT CCGCCGGTAC CCGATGCGGT GCCCGTCGGC CTGCCGTCGG AACTGGCGGA GCGTCGGCCC GATATTCGGA TGGCCGAGGA GCAGTTGCAT GTCGCCACCG CCAGCATCGG TGTGGCCGTG GCGGATTTCT TTCCGCGCGT GACGCTCTCC GGCAGCCTCG ACGTGCAAGC GCTGCAGTTC AGCGGGCTCG GGTCCTGGGC GTCGCGGCAA TACGGGTTCG GCCCGACCAT GACGCTGCCT CTGTTCGAGG GTGGTCGCCT GACCGGGCAA TTGCGTCTGC GCCGGGCGCA GCAGAAGGAA GCGGCGATCA CCCTGCAGCG CACCATCCTC AAGGCATGGC AGGAGATCGA CGACGCGATG GCCGATTTCT CCGCCGCCCA GCAGCAGCGC GACCGCCTGA AGGAGACAGT GGCCCAGAAC GAGACGGCCG TACGTCTGGC CCAGCAGCAA TACGTGCAGG GGGCGTCGGA TTTCCTGAAC GTGCTGACCT TGCAGAACGC GCTTCTGGCC AGCCAGAACC AGCTCGTGCG GTCGACGACG GCAGTTTCGG TCTCGGTGGC CCGCCTGTAT CGCGCGCTCG GCGGTGGCTG GGAGGCGCGC TATCCGGTCG CGACGGCCCA GCGGGCGGCC ATCCGGCAAG AGGGGCAGGG AGGTCGACAA GGATGA
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Protein sequence | MITRLNRQML ALTSMLLLSA CTVGPDYHKP DLASVPHWHR GLPDAESHPE ESPADPQWWT IYRDPVLTAL EQQVASANLD LRASAYRLAE SLAERRIASA AQFPHVEGNA SYARERASTN GILGLLGTLE RAGAGDVASG AQGFGPVAVP GTVGNPSFNL PQYGMSASWE VDLWGHVRRQ VEAANAAVKA TQDMQRDVLV SLMAETAQDY LDLRGVQAQI AIVGRNIDTA RHSVVLTGLR FAQGASTQLD VADSRGQLSE FQSRLPILQS QEVHLINALS FLVAREPGAL RAQLATPAPI PPVPDAVPVG LPSELAERRP DIRMAEEQLH VATASIGVAV ADFFPRVTLS GSLDVQALQF SGLGSWASRQ YGFGPTMTLP LFEGGRLTGQ LRLRRAQQKE AAITLQRTIL KAWQEIDDAM ADFSAAQQQR DRLKETVAQN ETAVRLAQQQ YVQGASDFLN VLTLQNALLA SQNQLVRSTT AVSVSVARLY RALGGGWEAR YPVATAQRAA IRQEGQGGRQ G
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