Gene Gdia_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1629 
Symbol 
ID6975045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1809188 
End bp1809859 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content65% 
IMG OID643391165 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002276022 
Protein GI209543793 
COG category 
COG ID 
TIGRFAM ID[TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.122898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.364818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTC GACTCCATGT CTGGGGTGAA CGCGCATGCT TTACGCGACC CGAACTGAAA 
TCGGAGCGTG TGTCGTATGA TGTCCTGACG CCATCGGCGG CGCGGGGCAT CGTGGAAGCC
ATCCACTGGA AGCCGGCCAT TCGCTGGCAT ATCGACCGCA TCCATGTCCT GAAGCCGATC
CGCTTCCAGT CGATCCGCCG GAACGAGGTC GGGGCCAAGG TGAGCGCCGT CCTCGCGGCC
CGGGCCATGA CTGCTGGCCA CACATCGGGC CTGGGCTTGG CGGTCGACGA GAATCGCCAG
CAGCGGGCGG CGACGATCCT GGTCGACGTA GCCTATGTCA TCGAGGCGCA CTTCACCCTG
ACGGCACGGG CCGGCGCGGG CGACACGGCG GCGAAGCATC TGAGCATGTT CAACCGGCGG
GCCACGCAGG GGCAATGTTT CCATCGCCCT TGCCTGGGAA CGCGGGAATT TCCGGCGGAT
TTCGCATTGA TTACCGAGGA AGCTCCCCTG CCCGCCTCGG CGTTTCCGCC CGATCTGCAA
GCGGTCGATC TGGGCTGGAT GCTGCACGAC ATCGATTTCG CGGACCAGCG CACGCCGCGC
TTTTTCCGTG CCTGCATCGA GAGCGGCGTG ATTGCGGTGC CGGCGGCCGA CAGTCCGGAC
CTGATCGCAT GA
 
Protein sequence
MGIRLHVWGE RACFTRPELK SERVSYDVLT PSAARGIVEA IHWKPAIRWH IDRIHVLKPI 
RFQSIRRNEV GAKVSAVLAA RAMTAGHTSG LGLAVDENRQ QRAATILVDV AYVIEAHFTL
TARAGAGDTA AKHLSMFNRR ATQGQCFHRP CLGTREFPAD FALITEEAPL PASAFPPDLQ
AVDLGWMLHD IDFADQRTPR FFRACIESGV IAVPAADSPD LIA