Gene Gdia_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1627 
Symbol 
ID6975043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1808300 
End bp1808710 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID643391163 
ProductPilT protein domain protein 
Protein accessionYP_002276020 
Protein GI209543791 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.733144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.420461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCT TTCTGCTGGA CACCAACTTG TGCATCCGTG TGTTGCGGGA CCGGCCGCAG 
GGCCTGCGGG CGCGGTTCAA TGCCTACGCC GAAGACCTCT GTATCTCCGA TGTCGTGCTA
TACGAACTGC TCTATGGGGC GGAGCGGTCG TCCGATCCCG TGCGTGTCAG GCGAGAGGTC
GAGCATTTCG CGGACAGACT GAATGTCCTG CCGTTCGACA GCGCGGCGGC GTCCCATACG
GCCGAGATCC GGGACGATCT CGAACGCAGG GGCTGCGTGA TCGGCCCCTA TGATCTGATG
ATCGCGGGAC ACGCCCGCAG CCGGGGGTTG GTGGTCGTCA CAGGCAATCT GGGCGAGTTC
AGGCGCGTTG CGGGGCTCAG GGCCGAAGAC TGGTTCACGA ATGTTGCCTG A
 
Protein sequence
MLRFLLDTNL CIRVLRDRPQ GLRARFNAYA EDLCISDVVL YELLYGAERS SDPVRVRREV 
EHFADRLNVL PFDSAAASHT AEIRDDLERR GCVIGPYDLM IAGHARSRGL VVVTGNLGEF
RRVAGLRAED WFTNVA