| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_1626 |
|---|
| Symbol | |
|---|
| ID | 6975042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 1805791 |
|---|
| End bp | 1808139 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643391162 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_002276019 |
|---|
| Protein GI | 209543790 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1203] Predicted helicases |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR01587] CRISPR-associated helicase Cas3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.869451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.728835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCT TCGCTCATTC GCTCCCTGAC GACCCCTCGA CAGAACGATG GGAAACGTTG
CGCGCGCATT CGCTGCGTGT CGCGGCCCTG GCCGAGCAAT TCGCCGCCGT GTTCGGCGCC
GCGCACAAGG GCCGGGCGCT GGGGTTGCTG CATGATATCG GGAAATGTTC GGCGGCCTAC
CAAGACTATA TTCGTAAGCC CGGGCCGTGC CACGGACCTG ACCACAGCAC GGCGGGCGCC
CGCGCCGTGG TCGCGTCCTA TGGACCGCTA GGACGGCTGC TGGCCTTTGC CATCGCGGGG
CACCATTCCG GCCTGATGGA CGGGTCGGGC CATGACGGCC CCGGACGGTC GCTGAACGAA
CGCCTGGACG AGCAGGCTTA TGCCGTTCCG GCCTCGGACA ATTGGCCGGA CTATTGTCCC
GCGCGGCCGA CCCTGCAGGA TCTGGTGGAC GAGTCGCCGC CGGTCGCCAG CACGGATTAT
CCGGGATTCG CGACCTCGTT TTTCGTCCGC ATGCTGTTTT CCTGCCTGAC GGATGCCGAT
TTCATCGCCA CCGAAGGATA TTACGCGGAA TCGGCAGGAT TGCCGCCACC CGCGCGCGGC
GGAACGATCA CCCAGGCCCA TCTGGATGCC ATCCGACGGT TCATGAAGAC ACGGCGGCGG
GACGATACAC CGCTGAACCG GCTGCGCAGC CGGATTCTGG ACCATGCGAT CGGCAAGGCC
GCCCTCGGAC CCGGCCTGTT CACGATGACG GTCCCTACAG GCGGGGGCAA GACGCTCGCC
TCGCTCAGCT TTGCACTGGA CCATGCGGTG CGGCATGGGC TGCGCCGCGT GATCTATGTG
ATCCCGTTCA CATCGATCAT CGAGCAGACG GCGACGGTGT TTCGCGAGGC TCTGGGTACG
ACGGACGGCA TCCTGGAACA TCATTCGAAT TTCGACTGGG ACCGACGCGC GCCGGCCGGC
GAGAACGACG AGGAAGCCGA AGGCGCTGAC GGCCTGGCGA AATTACGGCG CGACGCGGAA
AACTGGGACG CACCCATTAT CGTCACGACC AGCGTGCAGT TCTTCGAATC GCTGTTCGCG
GCACGGGGCA GCCAGGCCCG CAAGTTGCAC AACATTGCAG GCAGCGTGAT CATCCTGGAC
GAGGTGCAGA CGCTGCCGCT GCATCTACTG CGCCCCTGCC TCGCGGTCCT GGACGAACTG
GCCCGCAATT ACGGCGTGAG CATCGTGCTG TGTACCGCCA CGCAATCCGC CCTGCGGCAG
ATCGACGACG CGTTGCCGCC TGGGCGAAAG GGACGCCGGG CGGGGCTGGA TATCCAAGAC
ACGCACGAAC TAGCCCCCGA ACCCGCAGCG CTCTATGACG CGCTGCGCCG CGCTACCGTC
ACCTGGCGCA AGGAACCGGT ATCCGACGGC GAGATCGCCG CGCGTTTCGC GGTGCGCGAA
CAGATGCTGT GCATCGTCAA TACCAGGGCG CACGCGCATG ATCTGTTCAC CGCCATTGCC
GATCAGGACG GTGCACGGCA CCTGACAACG CTGATGTGCC CGCTCCATCG GCGCGCCACC
CTGGTAGCCA TACGCCAGGA TCTGAAAAAC GGACGGCCTG TCCGGCTGGT CTCCACCAGC
CTGATCGAAG CCGGTGTCGA TGTCGATTTC CCCGAGGTCT GGCGGGAAGC CACCGGATTA
TCCTCGATCA CGCAGGCCGC CGGACGATGC AATCGCGAGG GCCGCCTGGA CGAGCCAGGC
CCGGTGGTGG TGTTCGAGAC GCCTGACCCT GCCGACCCCA CGCAGCCATG GCTTGTGCGT
GCCATGCGCC CCTTCTGGCA GGCCACGCGT CCGATCCTGC GCCAGGGACT GGACCCGCTG
AGCCTGGAAG CCATTCATGC CTATTTCCGC GAACTGTATT TCCAACATAG CCATGACACG
CACGGACACG ACGGCCTGGA CGCCGCGCGG ATCGGCACCG TGCGCTACGC AATCCTGGAG
GCCATCGCGC AATCGGGTGC CGGCCACACC TATCCGTATG CCACCATTGC ACGGGCCTTC
CGCATGATCG ACACGGTCAT GGAGTCCGTC ATCATCCCGT GGGACGAAAC CGTACGGCAA
ATGCTGCATG CCCTTGACCA CGCACCCGTC CCACCGGCCG GATTCATGCG GCGCCTGCAA
CAATACTGCG TGCCGGTCCC CGCACCCATC CGGCTGAAAT TGCTGGCCGC CGGCGCCCTG
CGCACCGTCA AGCCCGAAGC GTATGGCGAC CGGTTCGTCT ACCTGGAATC AATGGATCTT
TACGATGCCC GCCGGGGTCT GAAACTGGAT GATCCCACGT TCCGCCATGC GGAAAGCAAT
GTGTGGTAG
|
|---|
| Protein sequence | MDIFAHSLPD DPSTERWETL RAHSLRVAAL AEQFAAVFGA AHKGRALGLL HDIGKCSAAY
QDYIRKPGPC HGPDHSTAGA RAVVASYGPL GRLLAFAIAG HHSGLMDGSG HDGPGRSLNE
RLDEQAYAVP ASDNWPDYCP ARPTLQDLVD ESPPVASTDY PGFATSFFVR MLFSCLTDAD
FIATEGYYAE SAGLPPPARG GTITQAHLDA IRRFMKTRRR DDTPLNRLRS RILDHAIGKA
ALGPGLFTMT VPTGGGKTLA SLSFALDHAV RHGLRRVIYV IPFTSIIEQT ATVFREALGT
TDGILEHHSN FDWDRRAPAG ENDEEAEGAD GLAKLRRDAE NWDAPIIVTT SVQFFESLFA
ARGSQARKLH NIAGSVIILD EVQTLPLHLL RPCLAVLDEL ARNYGVSIVL CTATQSALRQ
IDDALPPGRK GRRAGLDIQD THELAPEPAA LYDALRRATV TWRKEPVSDG EIAARFAVRE
QMLCIVNTRA HAHDLFTAIA DQDGARHLTT LMCPLHRRAT LVAIRQDLKN GRPVRLVSTS
LIEAGVDVDF PEVWREATGL SSITQAAGRC NREGRLDEPG PVVVFETPDP ADPTQPWLVR
AMRPFWQATR PILRQGLDPL SLEAIHAYFR ELYFQHSHDT HGHDGLDAAR IGTVRYAILE
AIAQSGAGHT YPYATIARAF RMIDTVMESV IIPWDETVRQ MLHALDHAPV PPAGFMRRLQ
QYCVPVPAPI RLKLLAAGAL RTVKPEAYGD RFVYLESMDL YDARRGLKLD DPTFRHAESN
VW
|
|---|
| |