Gene Gdia_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_1548 
Symbol 
ID6974958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp1726370 
End bp1727695 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content70% 
IMG OID643391079 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002275942 
Protein GI209543713 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.746039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAC CGCTGCACTA TATCGAAGGG TCGACAACGC TGCCCGCGTC GGCGGATGCC 
GTTGTCATCG GCGGCGGTAT CGTGGGGGTC TTCGCCGCGT ATTACCTGGC CCGGCGGGGC
CTGAGCGTCG CCCTGGTCGA AAAGGGGCGC GTGGGCGCCG AGCAGTCCAG CCGCAACTGG
GGCTGGTGCC GCCAGCAGAA CCGCGACGCG CGCGAACTGC CGATGGCGAC GCGCAGCCTG
GACCTGTGGC AGAGCTTCGC GGGCGAAAGC GGCGAGGATA CCGGCTTTCG CCGGTGCGGC
CTGCTGTACC TGAGCAATGA CGACGCCGAA ATCGAACGCT GGACGCGGTG GCGGGACTTC
GCCCGGACAG TGGGCGTCAC GACCACGATC CTGGACAGCG CCCAGGCGAC GGAGCGCGGC
ACCGCCAGCG GGCGGGCGTG GAAGGGTGGC GTGTTCTCGC CCTCCGACGG GGTCGCGGAC
CCCAGCATGG CCGCCCCCGC CGTCGCCCGG GCCATCATGA AGCTGGGCGG CACCGTGCTG
GAACACTGCG CCGCGCGCGG CATCGAACAG GAAGGCGGCC GCGTCAGCGG CGTCGTCACC
GAACGCGGAA CGATCAGGAC GCCCATCGCC ATCCATGCCG GCGGCGCCTG GGCGTCCTCC
TTCTGCCACC AGCTTGGCAT CCGTTTCCCG CAGGCCTCCA TCCGGTCGTC CAGCATGGCG
CTTTCACCCG GCGCCACCGG ATTGCCGGAC GCGCTTCATA CCAGCGAGAT CTCGTTCACG
CGGCGCAGTG ACGGCGGCTA TACGCTGGCC ATCAGCGGCT TCGGGCGCGT CGATGTCACG
CCCCAGCAAC TGCGCTTCGC GCCGCAGTTC CTGCCGATGT TCCTCAAACG CTGGCGCAGC
CTGGCCCCCG GCGGGCTGGA GGGCATACGC TCCGGCCACG AAACCCTGGC CCGCTGGCGC
CTCGATGCCC CCACCCCCAT GGAGCGCATG CGCATCCTCG ACCCCAGGCC GGACCGCGCG
AAATTGCGGC TGACCTACCG CCGCGCCGTG GAACTGCTGC CCGAACTGCG CAAGACACAG
ATCTCGGCCG CCTGGGCGGG CTATATCGAC GCGACGCCGG ACGGCGTTCC CGCCATCGGC
GAGATCAGCA CCGTGCCGGG CCTGATCCTG GCCGCCGGCT TCTCGGGCCA TGGGTTCGGC
ATCGGTCCGG GCGCCGGTCA TCTGGTCGCC GACCTTGTCA CCGGCGCGGC CCCGATCGTC
GATCCCGTGC CGTACAGCCC CGAGCGCTTC AGGGTTTCGT CCTGGGGGAA GGTTGCTGAA
TTCTAG
 
Protein sequence
MSAPLHYIEG STTLPASADA VVIGGGIVGV FAAYYLARRG LSVALVEKGR VGAEQSSRNW 
GWCRQQNRDA RELPMATRSL DLWQSFAGES GEDTGFRRCG LLYLSNDDAE IERWTRWRDF
ARTVGVTTTI LDSAQATERG TASGRAWKGG VFSPSDGVAD PSMAAPAVAR AIMKLGGTVL
EHCAARGIEQ EGGRVSGVVT ERGTIRTPIA IHAGGAWASS FCHQLGIRFP QASIRSSSMA
LSPGATGLPD ALHTSEISFT RRSDGGYTLA ISGFGRVDVT PQQLRFAPQF LPMFLKRWRS
LAPGGLEGIR SGHETLARWR LDAPTPMERM RILDPRPDRA KLRLTYRRAV ELLPELRKTQ
ISAAWAGYID ATPDGVPAIG EISTVPGLIL AAGFSGHGFG IGPGAGHLVA DLVTGAAPIV
DPVPYSPERF RVSSWGKVAE F